RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SLC31A2O15432 143 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 ZSCAN12O43309 604 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 LRATO95237 230 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 MRPL3P09001 348 aaKnown RBP1.99□□□□□ -2.09
CCDC38-204ENST00000546816 CYP2F1P24903 491 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 SHMT2P34897 504 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 HPCAL1P37235 193 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 NMUP48645 174 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 RAP1BP61224 184 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 TGFBR3Q03167 851 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 ENPEPQ07075 957 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 MXD4Q14582 209 aaPredicted RBP1.99□□□□□ -2.09
CCDC38-204ENST00000546816 PSG5Q15238 335 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 ATP6AP1Q15904 470 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 BEND3Q5T5X7 828 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 TIGD3Q6B0B8 471 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 CTRB2Q6GPI1 263 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 ACOT1Q86TX2 421 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 C12orf56Q8IXR9 622 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 CLEC4FQ8N1N0 589 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 ARL10Q8N8L6 244 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 OR5L2Q8NGL0 311 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 MCOLN3Q8TDD5 553 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 FAM3CQ92520 227 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 FCRL1Q96LA6 429 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 ALG12Q9BV10 488 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 IFI27L2Q9H2X8 130 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 IL26Q9NPH9 171 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 POLE3Q9NRF9 147 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 AK6Q9Y3D8 172 aaKnown RBP1.99□□□□□ -2.09
CCDC38-204ENST00000546816 PHF3Q92576 2039 aaKnown RBP1.99□□□□□ -2.09
CCDC38-204ENST00000546816 FANCIQ9NVI1 1328 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 CCDC182A6NF36 153 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 IDSB3KWA1 339 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 HIP1O00291 1037 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 BTN3A3O00478 584 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 UGT1A9O60656 530 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SPAG7O75391 227 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 GIPP09681 153 aaPredicted RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 HPGDP15428 266 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SLC26A3P40879 764 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 MAP3K8P41279 467 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 HSPA2P54652 639 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 IL1RL1Q01638 556 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SF3A2Q15428 464 aaKnown RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 MICBQ29980 383 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SAMD4BQ5PRF9 694 aaKnown RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 FRMPD2BQ6IN97 320 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 MFSD6LQ8IWD5 586 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SYT14Q8NB59 555 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 STXBP6Q8NFX7 210 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 OR4D9Q8NGE8 314 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 CCDC110Q8TBZ0 833 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 TIMD4Q96H15 378 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF641Q96N77 438 aaPredicted RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 RIT2Q99578 217 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF2Q9BSG1 426 aaPredicted RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 RAB34Q9BZG1 259 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 TMEM117Q9H0C3 514 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 DEFB127Q9H1M4 99 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 DPH5Q9H2P9 285 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 VCPKMTQ9H867 229 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF226Q9NYT6 803 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SLC25A37Q9NYZ2 338 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 SIGLEC8Q9NYZ4 499 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 ACTR3BQ9P1U1 418 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 ODF2LQ9ULJ1 636 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 RPL36Q9Y3U8 105 aaKnown RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 DHX57Q6P158 1386 aaKnown RBP1.98□□□□□ -2.09
CCDC38-204ENST00000546816 PLEKHH1Q9ULM0 1364 aa1.98□□□□□ -2.09
CCDC38-204ENST00000546816 FBN1P35555 2871 aaKnown RBP1.97□□□□□ -2.09
CCDC38-204ENST00000546816 IGLV11-55A0A075B6I3 123 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 IGKV1D-8A0A087WSZ0 117 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 A0A1B0GUS0 222 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 VSTM2BA6NLU5 285 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 F5H6K3 240 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 LOC110117498-PIK3R3F6TDL0 507 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 OR1F1O43749 312 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 N4BP1O75113 896 aaKnown RBP1.97□□□□□ -2.09
CCDC38-204ENST00000546816 RBMY1CP0DJD4 496 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF14P17017 642 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-204ENST00000546816 IMPDH1P20839 514 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 UQCRC2P22695 453 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 CXCR2P25025 360 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 KLRC3Q07444 240 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 TPD52L1Q16890 204 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-204ENST00000546816 SLC25A52Q3SY17 297 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 LRRC10Q5BKY1 277 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 GPRC6AQ5T6X5 926 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 AFTPHQ6ULP2 937 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF621Q6ZSS3 439 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 H2AFVQ71UI9 128 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF571Q7Z3V5 609 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-204ENST00000546816 PCP2Q8IVA1 136 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 TTC5Q8N0Z6 440 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 LRRC43Q8N309 656 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 CYB561D1Q8N8Q1 229 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 UBALD1Q8TB05 177 aa1.97□□□□□ -2.09
CCDC38-204ENST00000546816 ARPC1AQ92747 370 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms