RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 EGLN2Q96KS0 407 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 CCNL2Q96S94 520 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 EGLN3Q9H6Z9 239 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 PNO1Q9NRX1 252 aaKnown RBP11.93□□□□□ -0.5
PTCH1-212ENST00000546744 PLEKHM1Q9Y4G2 1056 aa11.93□□□□□ -0.5
PTCH1-212ENST00000546744 PHIPQ8WWQ0 1821 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 M0QZQ0 153 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 COCHO43405 550 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 STC2O76061 302 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 HLA-HP01893 362 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 PTAFRP25105 342 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 GPR85P60893 370 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 SLC7A9P82251 487 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 SEMG2Q02383 582 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 ACVR1Q04771 509 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 OPALINQ96PE5 141 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 DCDC2BA2VCK2 349 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 ADH1BP00325 375 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 ADH5P11766 374 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 LAP3P28838 519 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 KIR2DL3P43628 341 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 MMP15P51511 669 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 CCR6P51684 374 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 EMP2P54851 167 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF792Q3KQV3 632 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 BOCQ9BWV1 1114 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 TUBB1Q9H4B7 451 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 USP22Q9UPT9 525 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 GREB1LQ9C091 1923 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-212ENST00000546744 SURF4O15260 269 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 LPLP06858 475 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 HTR2CP28335 458 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF136P52737 540 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 MAP4K2Q12851 820 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 RBM23Q86U06 439 aaKnown RBP11.92□□□□□ -0.5
PTCH1-212ENST00000546744 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-212ENST00000546744 IL17RCQ8NAC3 791 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 KCNG3Q8TAE7 436 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 SLC38A5Q8WUX1 472 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 RAB9BQ9NP90 201 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 DKKL1Q9UK85 242 aa11.92□□□□□ -0.5
PTCH1-212ENST00000546744 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 TMEM72A0PK05 275 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 C11orf98E9PRG8 122 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF8P17098 575 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MEOX2P50222 304 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 GATMP50440 423 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 HBG1P69891 147 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 HBG2P69892 147 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 NOGQ13253 232 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 RAB33AQ14088 237 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MPPED2Q15777 294 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 TMEM225Q6GV28 225 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 IL20RBQ6UXL0 311 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 ERN2Q76MJ5 926 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 NAA40Q86UY6 237 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 BOLLQ8N9W6 283 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 OR2AK2Q8NG84 335 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 OR51T1Q8NGJ9 327 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 FIBINQ8TAL6 211 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 SMIM4Q8WVI0 70 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MIB2Q96AX9 1013 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 CPEB1Q9BZB8 566 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 TOLLIPQ9H0E2 274 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 CWH43Q9H720 699 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 TDP1Q9NUW8 608 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MAGEB4O15481 346 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 TNFP01375 233 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 FABP1P07148 127 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 PLP2Q04941 152 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 GPR18Q14330 331 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF74Q16587 644 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 OR4K15Q8NH41 348 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 ZC3HAV1LQ96H79 300 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 PSME4Q14997 1843 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MEIKINA0A087WXM9 373 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 ZNF840PA6NDX5 716 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 BTBD17A6NE02 478 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 KLK8O60259 260 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 LILRB5O75023 590 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 FURINP09958 794 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 CTHP32929 405 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 TAGLN2P37802 199 aaKnown RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 SOX4Q06945 474 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-212ENST00000546744 MBTPS1Q14703 1052 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 ST8SIA2Q92186 375 aa11.91□□□□□ -0.5
PTCH1-212ENST00000546744 NEIL2Q969S2 332 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms