RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RNASE6Q93091 150 aaKnown RBP14.99□□□□□ -0.01
LTBR-215ENST00000546296 TAAR8Q969N4 342 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 MPP4Q96JB8 637 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 PSD2Q9BQI7 771 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 TMEM43Q9BTV4 400 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 THTPAQ9BU02 230 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 AMBRA1Q9C0C7 1298 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 OPN3Q9H1Y3 402 aaPredicted RBP14.99□□□□□ -0.01
LTBR-215ENST00000546296 C12orf49Q9H741 205 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 JKAMPQ9P055 326 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 EMC3Q9P0I2 261 aa14.99□□□□□ -0.01
LTBR-215ENST00000546296 SPTBN1Q01082 2364 aaKnown RBP14.98□□□□□ -0.01
LTBR-215ENST00000546296 A8MXE2 369 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 PDE5AO76074 875 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 THY1P04216 161 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 CD8BP10966 210 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 COX6B1P14854 86 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 CBLP22681 906 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 YAP1P46937 504 aaKnown RBP14.98□□□□□ -0.01
LTBR-215ENST00000546296 H3F3AP84243 136 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 FXNQ16595 210 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 DNAL1Q4LDG9 190 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 TMEM225Q6GV28 225 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 ABLIM2Q6H8Q1 611 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 MEX3BQ6ZN04 569 aaKnown RBP14.98□□□□□ -0.01
LTBR-215ENST00000546296 STK32CQ86UX6 486 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 TSPYL5Q86VY4 417 aaPredicted RBP14.98□□□□□ -0.01
LTBR-215ENST00000546296 CYP4Z1Q86W10 505 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 TMEM99Q8N816 258 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 ZNF610Q8N9Z0 462 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 PTDSS2Q9BVG9 487 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 NPDC1Q9NQX5 325 aaPredicted RBP14.98□□□□□ -0.01
LTBR-215ENST00000546296 PLSCR4Q9NRQ2 329 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 FOXD3Q9UJU5 478 aaPredicted RBP14.98□□□□□ -0.01
LTBR-215ENST00000546296 V9GYQ6 96 aa14.98□□□□□ -0.01
LTBR-215ENST00000546296 PTPN13Q12923 2485 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 ZNF724A8MTY0 619 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 ZNF814B7Z6K7 855 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 GPR171O14626 319 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 LYPD3O95274 346 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 STAMBPO95630 424 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 CGAP01215 116 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 ST3GAL3Q11203 375 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 PDK3Q15120 406 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 EXOC3L2Q2M3D2 409 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 FBXL19-AS1Q494R0 122 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 FAM69AQ5T7M9 428 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 LINC00114Q6XXX2 140 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 NUFIP2Q7Z417 695 aaKnown RBP14.97□□□□□ -0.01
LTBR-215ENST00000546296 GALNT5Q7Z7M9 940 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 GPAT4Q86UL3 456 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 KIF18BQ86Y91 864 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 PYURFQ96I23 114 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 ZNF300Q96RE9 604 aaPredicted RBP14.97□□□□□ -0.01
LTBR-215ENST00000546296 BTBD10Q9BSF8 475 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 FNDC11Q9BVV2 318 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 ASPNQ9BXN1 380 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 BCO1Q9HAY6 547 aa14.97□□□□□ -0.01
LTBR-215ENST00000546296 ING1Q9UK53 422 aaPredicted RBP14.97□□□□□ -0.01
LTBR-215ENST00000546296 FAM32AQ9Y421 112 aaKnown RBP14.97□□□□□ -0.01
LTBR-215ENST00000546296 ASH1LQ9NR48 2969 aaKnown RBP14.97□□□□□ -0.01
LTBR-215ENST00000546296 DOCK7Q96N67 2140 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 IGKV3D-15A0A087WSY6 115 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 AQP7P3A6NL99 342 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 ZNF716A6NP11 495 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 KPNA4O00629 521 aaPredicted RBP14.96□□□□□ -0.01
LTBR-215ENST00000546296 RAMP1O60894 148 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 THRBP10828 461 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 IL1RL1Q01638 556 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 BNIP1Q12981 228 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 MFSD13AQ14CX5 517 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 CYP2R1Q6VVX0 501 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 WDR88Q6ZMY6 472 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 DHFR2Q86XF0 187 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 ZNF100Q8IYN0 542 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 OR6S1Q8NH40 331 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 MCUR1Q96AQ8 359 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 CLPTM1LQ96KA5 538 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 PRRC1Q96M27 445 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 MUC13Q9H3R2 512 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 FANCFQ9NPI8 374 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 GALNT8Q9NY28 637 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 ACTR3BQ9P1U1 418 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 RHCGQ9UBD6 479 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 A4GNTQ9UNA3 340 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 NOSIPQ9Y314 301 aaKnown RBP14.96□□□□□ -0.01
LTBR-215ENST00000546296 ICE1Q9Y2F5 2266 aa14.96□□□□□ -0.01
LTBR-215ENST00000546296 FLNBO75369 2602 aaKnown RBP14.96□□□□□ -0.02
LTBR-215ENST00000546296 FTCDNL1E5RQL4 147 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 J3KTA2 159 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 M0R082 166 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 ATP5HO75947 161 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 VAMP5O95183 116 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 NQO1P15559 274 aaKnown RBP14.95□□□□□ -0.02
LTBR-215ENST00000546296 GRPRP30550 384 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 RBM34P42696 430 aaKnown RBP14.95□□□□□ -0.02
LTBR-215ENST00000546296 RASSF2P50749 326 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 SLC16A1P53985 500 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 CBX1P83916 185 aa14.95□□□□□ -0.02
LTBR-215ENST00000546296 TRIM25Q14258 630 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms