RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GUSBP1Q15486 140 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 MAPRE2Q15555 327 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 MMEL1Q495T6 779 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 RUNDC3AQ59EK9 446 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 WBP2NLQ6ICG8 309 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF474Q6S9Z5 364 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-224ENST00000544990 DLEU7Q6UYE1 221 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF836Q6ZNA1 936 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ADGRG3Q86Y34 549 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 MSRB3Q8IXL7 192 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 BHLHE22Q8NFJ8 381 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-224ENST00000544990 NFKBIDQ8NI38 313 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 RNF128Q8TEB7 428 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ABHD3Q8WU67 409 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 MAL2Q969L2 176 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 SLC35B4Q969S0 331 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF524Q96C55 264 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ANKRD27Q96NW4 1050 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 DACH2Q96NX9 599 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CGREF1Q99674 301 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 POLDIP3Q9BY77 421 aaKnown RBP6.57□□□□□ -1.36
CPSF7-224ENST00000544990 SRXN1Q9BYN0 137 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF385DQ9H6B1 395 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 TMEM38AQ9H6F2 299 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 COQ10BQ9H8M1 238 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 RLIMQ9NVW2 624 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF226Q9NYT6 803 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 KLHL14Q9P2G3 628 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 KLHL9Q9P2J3 617 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 OSGIN1Q9UJX0 560 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 EDARQ9UNE0 448 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 ANGPT4Q9Y264 503 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 TRAPPC4Q9Y296 219 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 TMED7Q9Y3B3 224 aa6.57□□□□□ -1.36
CPSF7-224ENST00000544990 CRYBG3Q68DQ2 2970 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 IGHV3-15A0A0B4J1V0 119 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SH3D21A4FU49 640 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 PRORSD1PA6NEY8 169 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 ENO4A6NNW6 628 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 BBIP1A8MTZ0 92 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 C16orf97H3BN30 126 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 AP3D1O14617 1153 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CTAG2O75638 210 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 PMS2P2O95744 297 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 NPPAP01160 153 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 GKN3PP0CG01 181 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CCNA2P20248 432 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 AGTR1P30556 359 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 PRKAR1BP31321 381 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 UGT2B10P36537 528 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 ACAA2P42765 397 aaKnown RBP6.56□□□□□ -1.36
CPSF7-224ENST00000544990 OR2B6P58173 313 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SLC35A1P78382 337 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 TEKQ02763 1124 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SF3A3Q12874 501 aaKnown RBP eCLIP6.56□□□□□ -1.36
CPSF7-224ENST00000544990 KLF10Q13118 480 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CYP51A1Q16850 503 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 EXOC3L2Q2M3D2 409 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SLC30A8Q8IWU4 369 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 TUSC5Q8IXB3 177 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CLIP4Q8N3C7 705 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CADM2Q8N3J6 435 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 PCYOX1LQ8NBM8 494 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 C11orf65Q8NCR3 313 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 HIPK4Q8NE63 616 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 PIGXQ8TBF5 258 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 ARL5BQ96KC2 179 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SH3GL1Q99961 368 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CPPED1Q9BRF8 314 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-224ENST00000544990 GPATCH1Q9BRR8 931 aaKnown RBP6.56□□□□□ -1.36
CPSF7-224ENST00000544990 NAA11Q9BSU3 229 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-224ENST00000544990 MED18Q9BUE0 208 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 KLHL4Q9C0H6 718 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 EVA1AQ9H8M9 152 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SAR1AQ9NR31 198 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 RASSF1Q9NS23 344 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 KLHL28Q9NXS3 571 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 TMEM181Q9P2C4 612 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 KLHL13Q9P2N7 655 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 RPS6KB2Q9UBS0 482 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 SLC13A4Q9UKG4 626 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 ITPR2Q14571 2701 aa6.56□□□□□ -1.36
CPSF7-224ENST00000544990 CELSR2Q9HCU4 2923 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 CENPEQ02224 2701 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 TMEM72A0PK05 275 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 ZNF724A8MTY0 619 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 A8MVM7 634 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 GPR171O14626 319 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 SMAD9O15198 467 aaKnown RBP6.55□□□□□ -1.36
CPSF7-224ENST00000544990 SLC22A2O15244 555 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 EIF1BO60739 113 aaKnown RBP6.55□□□□□ -1.36
CPSF7-224ENST00000544990 CYTIPO60759 359 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 CCDC22O60826 627 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 GPIP06744 558 aa6.55□□□□□ -1.36
CPSF7-224ENST00000544990 FESP07332 822 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms