RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TMED7Q9Y3B3 224 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 SCN9AQ15858 1988 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 PAHP00439 452 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 CDK2P24941 298 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 SSR4P51571 173 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 LIM2P55344 173 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 VHLLQ6RSH7 139 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ESPNLQ6ZVH7 1005 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 LINC00346Q8IVM7 164 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 OR13C9Q8NGT0 318 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ZNF582Q96NG8 517 aaPredicted RBP11.87□□□□□ -0.51
CHD4-211ENST00000544484 INPP5EQ9NRR6 644 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 A0A1B0GVG6 124 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 PLSCR5A0PG75 271 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 GAAP10253 952 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 FAM198BQ6UWH4 519 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 DNAJC5GQ8N7S2 189 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 OR5D18Q8NGL1 313 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 CCL4L1Q8NHW4 92 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 HSD17B8Q92506 261 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ARSGQ96EG1 525 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 OR51J1Q9H342 316 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 PDFQ9HBH1 243 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 NDUFAF4Q9P032 175 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 EMC3Q9P0I2 261 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 ASB4Q9Y574 426 aa11.87□□□□□ -0.51
CHD4-211ENST00000544484 H3BUI4 141 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CD27P26842 260 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 PLGLAQ15195 96 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CNN3Q15417 329 aaKnown RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 DUSP7Q16829 419 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 EXOSC6Q5RKV6 272 aaKnown RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 ZNF511Q8NB15 262 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 FAM174AQ8TBP5 190 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 OBP2AQ9NY56 170 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 OR14J1Q9UGF5 321 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 TRIM64BA6NI03 449 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CTNSO60931 367 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 EDN3P14138 238 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 PIGAP37287 484 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 BIDP55957 195 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 DUSP6Q16828 381 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 AAED1Q7RTV5 226 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 GHSRQ92847 366 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 ELSPBP1Q96BH3 223 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 OR5M11Q96RB7 305 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 RCE1Q9Y256 329 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 NUP205Q92621 2012 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 IGLV3-25P01717 112 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CD63P08962 238 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CR2P20023 1033 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 DPP4P27487 766 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CCR2P41597 374 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 PYCR3Q53H96 274 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 RPL22L1Q6P5R6 122 aaKnown RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 MKXQ8IYA7 352 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 ADAMTS14Q8WXS8 1223 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 GPX2P18283 190 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CD53P19397 219 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 FOXK2Q01167 660 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 EIF2S3LQ2VIR3 472 aaKnown RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 KDM8Q8N371 416 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 A4GALTQ9NPC4 353 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 IL13RA1P78552 427 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 MUL1Q969V5 352 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 UTP23Q9BRU9 249 aaKnown RBP11.86□□□□□ -0.51
CHD4-211ENST00000544484 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 OLAHQ9NV23 265 aa11.86□□□□□ -0.51
CHD4-211ENST00000544484 CCDC163A0A0D9SF12 145 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 TRIM64CA6NLI5 447 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 SHC1P29353 583 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 LRRC56Q8IYG6 542 aaPredicted RBP11.85□□□□□ -0.51
CHD4-211ENST00000544484 SNAPC3Q92966 411 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 TXNDC15Q96J42 360 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 SLC46A1Q96NT5 459 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 PSORS1C1Q9UIG5 152 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 OR5K3A6NET4 321 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 TTLL8A6PVC2 850 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 IL1AP01583 271 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ICAM2P13598 275 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 TCN2P20062 427 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ARL3P36405 182 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 C17orf67Q0P5P2 114 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 CALHM2Q9HA72 323 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 NOX3Q9HBY0 568 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 HS3ST3A1Q9Y663 406 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 DDX60LQ5H9U9 1706 aaKnown RBP11.85□□□□□ -0.51
CHD4-211ENST00000544484 MEIOCA2RUB1 952 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 AGPAT2O15120 278 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 MPPED1O15442 326 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 SLC43A1O75387 559 aa11.85□□□□□ -0.51
CHD4-211ENST00000544484 ZDHHC11BP0C7U3 371 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms