RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 RNF113BQ8IZP6 322 aaKnown RBP7.5□□□□□ -1.21
AFF1-211ENST00000544085 OR4K5Q8NGD3 323 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 OR9Q2Q8NGE9 314 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 ADAMTS14Q8WXS8 1223 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 ROBO4Q8WZ75 1007 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 ADIPOR1Q96A54 375 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 NEU1Q99519 415 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 FBXO34Q9NWN3 711 aa7.5□□□□□ -1.21
AFF1-211ENST00000544085 NDRG4Q9ULP0 352 aaKnown RBP7.5□□□□□ -1.21
AFF1-211ENST00000544085 SCN2AQ99250 2005 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 NPIPA5A0A0B4J1W7 369 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 A8MXE2 369 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 NPIPA7E9PJI5 369 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 WRBO00258 174 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 MT-CO3P00414 261 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 NGFRP08138 427 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 HOXD4P09016 255 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 NPIPA8P0DM63 369 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 OSMP13725 252 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 RAB3AP20336 220 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 HTR3AP46098 478 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 PNLIPRP2P54317 469 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 CDC42P60953 191 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 PLCXD2Q0VAA5 305 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 ISXQ2M1V0 245 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 CCDC157Q569K6 752 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 ZNF770Q6IQ21 691 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 JMJD6Q6NYC1 403 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 TMEM81Q6P7N7 255 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 HSDL2Q6YN16 418 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 LAPTM4BQ86VI4 370 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 CPEB3Q8NE35 698 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 TSPAN14Q8NG11 270 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 AKR7LQ8NHP1 331 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 NUBPLQ8TB37 319 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 MARVELD3Q96A59 401 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 HRASLS5Q96KN8 279 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 SPSB2Q99619 263 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 WDR77Q9BQA1 342 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 SEMA4CQ9C0C4 833 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 NXF5Q9H1B4 397 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 SCN3BQ9NY72 215 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 SPTBP11277 2137 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 AGRPO00253 132 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 SMAD9O15198 467 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 ABCB7O75027 752 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 CSTAP01040 98 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 IGKV1D-16P01601 117 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 GGT2P36268 569 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 EIF2S3P41091 472 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 CRISP1P54107 249 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 NR1H2P55055 460 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 GABARAPL2P60520 117 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 OR1Q1Q15612 314 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 PGBD2Q6P3X8 592 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 C6orf15Q6UXA7 325 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 LANCL3Q6ZV70 420 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 GDF7Q7Z4P5 450 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 CDK20Q8IZL9 346 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 OR4N2Q8NGD1 307 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 OR10J5Q8NHC4 309 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 WFDC12Q8WWY7 111 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 C5orf34Q96MH7 638 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 SNX18Q96RF0 628 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 RSPO3Q9BXY4 272 aaPredicted RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 PRRG3Q9BZD7 231 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 ESRP2Q9H6T0 727 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 EXOSC3Q9NQT5 275 aaKnown RBP7.49□□□□□ -1.21
AFF1-211ENST00000544085 TPRKBQ9Y3C4 175 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 CHST2Q9Y4C5 530 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 UNC80Q8N2C7 3258 aa7.49□□□□□ -1.21
AFF1-211ENST00000544085 GTPBP1O00178 669 aaKnown RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 CSO75390 466 aaKnown RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 UTS2O95399 124 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 GASTP01350 101 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 RAB40ALP0C0E4 278 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 PF4V1P10720 104 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 TBXA2RP21731 343 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 NUP62P37198 522 aaPredicted RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 FOLR3P41439 243 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 STAT5AP42229 794 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 SLC6A8P48029 635 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 NR0B1P51843 470 aaKnown RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 ZNF136P52737 540 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 CXCR4P61073 352 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 INSM1Q01101 510 aaPredicted RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 MEDAGQ5VYS4 303 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 ANKRD34AQ69YU3 496 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 C1orf94Q6P1W5 598 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 NAXEQ8NCW5 288 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 WDR36Q8NI36 951 aaKnown RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 SLC7A13Q8TCU3 470 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 SNAPC3Q92966 411 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 SLC19A3Q9BZV2 496 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 IMPAD1Q9NX62 359 aa7.48□□□□□ -1.21
AFF1-211ENST00000544085 DNAJB12Q9NXW2 375 aaKnown RBP7.48□□□□□ -1.21
AFF1-211ENST00000544085 KCNE5Q9UJ90 142 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms