RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PIGXQ8TBF5 258 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 EEF1AKMT1Q8WVE0 214 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 DNASE2BQ8WZ79 361 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 SLC35G5Q96KT7 338 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 CGRRF1Q99675 332 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 ACTRT3Q9BYD9 372 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 PADI3Q9ULW8 664 aa8.23□□□□□ -1.09
VPS13D-212ENST00000543766 PRAMEF33A0A0G2JMD5 474 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 FAM240BA0A1B0GVZ2 78 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 RPS10-NUDT3A0A1W2PQS6 291 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 ANHXE9PGG2 379 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 PRAMEF10O60809 474 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 GGCTO75223 188 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 UGT2B17O75795 530 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SYPP08247 313 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 FABP4P15090 132 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 KCNE1P15382 129 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 MNDAP41218 407 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 DAOAP59103 153 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 DUSP2Q05923 314 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SF3A2Q15428 464 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 C5orf64Q2M2E5 130 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 PDLIM3Q53GG5 364 aaPredicted RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 LAMTOR1Q6IAA8 161 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 LYG1Q8N1E2 194 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 PARP16Q8N5Y8 322 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SCRN2Q96FV2 425 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 ZNF583Q96ND8 569 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SMIM3Q9BZL3 60 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SLIRPQ9GZT3 109 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 ZBTB26Q9HCK0 441 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 LYARQ9NX58 379 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 UBE2J1Q9Y385 318 aaPredicted RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 PCDHB7Q9Y5E2 793 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 K7ERI5 159 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TSPAN2O60636 221 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 AREGP15514 252 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 GOT1P17174 413 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TBPP20226 339 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 DUSP1P28562 367 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 PNLIPRP2P54317 469 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 C17orf99Q6UX52 265 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 PIM3Q86V86 326 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 CBR4Q8N4T8 237 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SLC22A17Q8WUG5 538 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 LPAR1Q92633 364 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 NOL4LQ96MY1 436 aaPredicted RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 FSD1LQ9BXM9 530 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 ANKHQ9HCJ1 492 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM160Q9NX00 188 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 KLHL21Q9UJP4 597 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 MEIS2O14770 477 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 CHADO15335 359 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 GLCEO94923 617 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 LALBAP00709 142 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 IFNA17P01571 189 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 AHSGP02765 367 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 INHAP05111 366 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 ANXA2P07355 339 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TRAPPC2P0DI81 140 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TRAPPC2BP0DI82 140 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 HLA-EP13747 358 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 FPR1P21462 350 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 APLNRP35414 380 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 MATKP42679 507 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 GATA4P43694 442 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 GP2P55259 537 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 CRYZQ08257 329 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 GPR50Q13585 617 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 EIPR1Q53HC9 387 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 B3GLCTQ6Y288 498 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 LDLRAD3Q86YD5 345 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM123Q8N131 208 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 AMER2Q8N7J2 671 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 OR7G2Q8NG99 324 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SCLYQ96I15 445 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 HSPA12BQ96MM6 686 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 CHRNA10Q9GZZ6 450 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 SPRTNQ9H040 489 aaPredicted RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 RNF121Q9H920 327 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 KCMF1Q9P0J7 381 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 STOX2Q9P2F5 926 aaPredicted RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 MRPS33Q9Y291 106 aaKnown RBP8.22□□□□□ -1.09
VPS13D-212ENST00000543766 NPTNQ9Y639 398 aa8.22□□□□□ -1.09
VPS13D-212ENST00000543766 A0A0J9YYE9 177 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 D6RAR5 112 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 GJB5O95377 273 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 TRBC1P01850 177 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 SELEP16581 610 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 CALCRP30988 508 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 PIGFQ07326 219 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 OCIAD2Q56VL3 154 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 LIPKQ5VXJ0 399 aa8.21□□□□□ -1.09
VPS13D-212ENST00000543766 DHRS7BQ6IAN0 325 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms