RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 Q6ZSR9 355 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NUFIP2Q7Z417 695 aaKnown RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 BPIFB2Q8N4F0 458 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF781Q8N8C0 355 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 C9orf106Q8NAJ2 232 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 BBS1Q8NFJ9 593 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 OR52B6Q8NGF0 335 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 MAGEE2Q8TD90 523 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 HCAR2Q8TDS4 363 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ACMSDQ8TDX5 336 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CCDC12Q8WUD4 166 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NUDCD2Q8WVJ2 157 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 C11orf52Q96A22 123 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 KIAA1143Q96AT1 154 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 EFHD2Q96C19 240 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 LRRC39Q96DD0 335 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 C19orf60Q96EN9 201 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 CNRIP1Q96F85 164 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PRRC1Q96M27 445 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 FMO2Q99518 471 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 NIPSNAP3BQ9BS92 247 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 YIPF3Q9GZM5 350 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ILKAPQ9H0C8 392 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 LIME1Q9H400 295 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 RNF41Q9H4P4 317 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 TDRD3Q9H7E2 651 aaKnown RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 ELL3Q9HB65 397 aaPredicted RBP3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 POPDC2Q9HBU9 364 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC40A1Q9NP59 571 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 B3GAT2Q9NPZ5 323 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 DEPPQ9NTK1 212 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 IL20Q9NYY1 176 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 THYN1Q9P016 225 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 KCNG2Q9UJ96 466 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SCML2Q9UQR0 700 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PRELID1Q9Y255 219 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 PEX16Q9Y5Y5 336 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 BRCA2P51587 3418 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SBF1O95248 1867 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 COL6A3P12111 3177 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 SCN4AP35499 1836 aa3.28□□□□□ -1.88
SFSWAP-211ENST00000542813 LTN1O94822 1766 aa3.28□□□□□ -1.89
SFSWAP-211ENST00000542813 MKI67P46013 3256 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 MROH7-TTC4A0A0A0MT08 1334 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 H3BMQ9 156 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 NDUFS8O00217 210 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 P2RY10O00398 339 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 RGS16O15492 202 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 RS1O15537 224 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 RNF113AO15541 343 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 BUB3O43684 328 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 CTDNEP1O95476 244 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 FGFR1OPO95684 399 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 AP2A1O95782 977 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 CD48P09326 243 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 UBTFL6P0CB48 400 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 PRSS56P0CW18 603 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 PRKACAP17612 351 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 PDHA2P29803 388 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 GNA11P29992 359 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ALDH3A1P30838 453 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 HLCSP50747 726 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 NDUFA8P51970 172 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ACLYP53396 1101 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 HADHBP55084 474 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 RPL8P62917 257 aaKnown RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 GNGT1P63211 74 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 GSTO1P78417 241 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 CDK16Q00536 496 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 LIPEQ05469 1076 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF33BQ06732 778 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF177Q13360 481 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 LAGE3Q14657 143 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZIC1Q15915 447 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 BCL2A1Q16548 175 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 WHAMMP3Q1A5X7 153 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 NKAIN1Q4KMZ8 207 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 DMRTC1Q5HYR2 192 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ACER2Q5QJU3 275 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 PLCXD3Q63HM9 321 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 LCLAT1Q6UWP7 414 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ENPP6Q6UWR7 440 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 C6orf89Q6UWU4 347 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 FRRS1Q6ZNA5 592 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 C19orf35Q6ZS72 473 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 USP50Q70EL3 339 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SLC26A9Q7LBE3 791 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SSX9Q7RTT3 188 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 PRSS48Q7RTY5 328 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SCD5Q86SK9 330 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 CCDC71Q8IV32 467 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SLC35F6Q8N357 371 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 SPERTQ8NA61 448 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNRF1Q8ND25 227 aa3.27□□□□□ -1.89
SFSWAP-211ENST00000542813 OR7G2Q8NG99 324 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms