RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 BCDIN3DQ7Z5W3 292 aaKnown RBP11.96□□□□□ -0.49
CHFR-221ENST00000542714 SULF2Q8IWU5 870 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 FAM26EQ8N5C1 309 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 ATP6V1C2Q8NEY4 427 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 TSPAN14Q8NG11 270 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 OR8J1Q8NGP2 316 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 TMEM163Q8TC26 289 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 TRUB1Q8WWH5 349 aaKnown RBP11.96□□□□□ -0.49
CHFR-221ENST00000542714 HAS2Q92819 552 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 SCMH1Q96GD3 660 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 GPX7Q96SL4 187 aaPredicted RBP11.96□□□□□ -0.49
CHFR-221ENST00000542714 IFT27Q9BW83 186 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 POTEKPQ9BYX7 375 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 OR2B2Q9GZK3 357 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 ZFP64Q9NPA5 681 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 KLHL1Q9NR64 748 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 DNAJC27Q9NZQ0 273 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 SCOCQ9UIL1 159 aa11.96□□□□□ -0.49
CHFR-221ENST00000542714 RPH3AQ9Y2J0 694 aaPredicted RBP11.96□□□□□ -0.49
CHFR-221ENST00000542714 MED12Q93074 2177 aa11.96□□□□□ -0.5
CHFR-221ENST00000542714 SPTBN2O15020 2390 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 OR2M5A3KFT3 312 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 H3BML4 177 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 TLX2O43763 284 aaPredicted RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 FAM20BO75063 409 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 ENTPD6O75354 484 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 HMGN1P05114 100 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 ZNF17P17021 662 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 MAP2K6P52564 334 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 FOXK2Q01167 660 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 RPL18Q07020 188 aaKnown RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 PIGFQ07326 219 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 SELENBP1Q13228 472 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 OCLNQ16625 522 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 ANKDD1AQ495B1 522 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 GLYR1Q49A26 553 aaPredicted RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 SYT14P1Q58G82 188 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 ZNF362Q5T0B9 420 aaPredicted RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 SLC6A19Q695T7 634 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 SLC25A25Q6KCM7 469 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 MAMDC2Q7Z304 686 aaPredicted RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 NANOGNBQ7Z5D8 188 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 YRDCQ86U90 279 aaKnown RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 MFSD8Q8NHS3 518 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 SLC25A36Q96CQ1 311 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 DDIT4LQ96D03 193 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 SLC38A2Q96QD8 506 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 MRPS26Q9BYN8 205 aaKnown RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 DUSP21Q9H596 190 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 TMEM185BQ9H7F4 350 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 SERINC1Q9NRX5 453 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 FKBP14Q9NWM8 211 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 DKK4Q9UBT3 224 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 BOKQ9UMX3 212 aaPredicted RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 BAIAP2Q9UQB8 552 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 GPR52Q9Y2T5 361 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
CHFR-221ENST00000542714 CSAG2Q9Y5P2 127 aa11.95□□□□□ -0.5
CHFR-221ENST00000542714 SH3D21A4FU49 640 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 LIPT2A6NK58 231 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 KDM4EB2RXH2 506 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 BLOC1S5-TXNDC5H3BN57 136 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 M0R082 166 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 GLSO94925 669 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 OPN1LWP04000 364 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 TFPIP10646 304 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 PEPDP12955 493 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 IDUAP35475 653 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 MEOX1P50221 254 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 PRPS1P60891 318 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 SLC35A2P78381 396 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 ARG2P78540 354 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 MYBPHQ13203 477 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 SGCBQ16585 318 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 SLC35F1Q5T1Q4 408 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 RAET1LQ5VY80 246 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 GALNTL5Q7Z4T8 443 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 FAM83FQ8NEG4 500 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 OR5J2Q8NH18 312 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 ZNF417Q8TAU3 575 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 SLC25A43Q8WUT9 341 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 GGHQ92820 318 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 ZNF582Q96NG8 517 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 ERMAPQ96PL5 475 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 SIGLEC11Q96RL6 698 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 ZNF587Q96SQ5 575 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 KATNB1Q9BVA0 655 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 TAPBPLQ9BX59 468 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 TTTY12Q9BZ98 90 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 ZNF703Q9H7S9 590 aaPredicted RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 AMBNQ9NP70 447 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 HINT3Q9NQE9 182 aaKnown RBP11.94□□□□□ -0.5
CHFR-221ENST00000542714 CMC2Q9NRP2 79 aa11.94□□□□□ -0.5
CHFR-221ENST00000542714 CLN6Q9NWW5 311 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms