RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MBTD1Q05BQ5 628 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 TNFRSF9Q07011 255 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 C2orf80Q0P641 193 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 FABP9Q0Z7S8 132 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 PDZK1IP1Q13113 114 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 HMGN3Q15651 99 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF630Q2M218 657 aaPredicted RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 DEFB115Q30KQ5 88 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF699Q32M78 642 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 TMEM35AQ53FP2 167 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 MEDAGQ5VYS4 303 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 OR4F3Q6IEY1 312 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 HEPHL1Q6MZM0 1159 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 SLC25A24Q6NUK1 477 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 SPESP1Q6UW49 350 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 LCLAT1Q6UWP7 414 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ALKAL1Q6UXT8 129 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 RBMS3Q6XE24 437 aaKnown RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 CERS6Q6ZMG9 384 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 DCXRQ7Z4W1 244 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 TGIF2LXQ8IUE1 241 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 CNTN4Q8IWV2 1026 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 LAS2Q8IYD9 372 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 CFAP206Q8IYR0 622 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF619Q8N2I2 560 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF283Q8N7M2 679 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 FAM71CQ8NEG0 241 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 GPRC5AQ8NFJ5 357 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 BEST4Q8NFU0 473 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 OR2L3Q8NG85 312 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 OR10A7Q8NGE5 316 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 OR5B17Q8NGF7 314 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 OR6K3Q8NGY3 331 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 MRGPRDQ8TDS7 321 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 RXFP4Q8TDU9 374 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 FAM151AQ8WW52 585 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 SLAMF9Q96A28 289 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ULK4Q96C45 1275 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 MRPL38Q96DV4 380 aaKnown RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ZBED6CLQ96FA7 236 aaPredicted RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 MASTLQ96GX5 879 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 LRR1Q96L50 414 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 GPR78Q96P69 363 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 KLHL5Q96PQ7 755 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 TEFMQ96QE5 360 aaKnown RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 KCNS3Q9BQ31 491 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ADPGKQ9BRR6 497 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 NDUFAF3Q9BU61 184 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 MSTO1Q9BUK6 570 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 NFKBIZQ9BYH8 718 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 OR51E2Q9H255 320 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 RIMS4Q9H426 269 aaPredicted RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 ISYNA1Q9NPH2 558 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 VNN3Q9NY84 501 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 KLHL9Q9P2J3 617 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 UTS2RQ9UKP6 389 aa5.34□□□□□ -1.55
XRCC4-206ENST00000542685 SAMD4AQ9UPU9 718 aaKnown RBP5.34□□□□□ -1.55
XRCC4-206ENST00000542685 MEX3AA1L020 520 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 METTL21EPA6NDL7 271 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 OR6C68A6NDL8 312 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 DDX39AO00148 427 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 NR5A2O00482 541 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SURF4O15260 269 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SIGLEC5O15389 551 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 LRRTM2O43300 516 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 PPIHO43447 177 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 GPRIN2O60269 458 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TSPAN3O60637 253 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SLC22A3O75751 556 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 BEST1O76090 585 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 KDM4BO94953 1096 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 METTL18O95568 372 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CALCAP01258 141 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CD2P06729 351 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CLTBP09497 229 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 GKN3PP0CG01 181 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 HAPLN1P10915 354 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ABOP16442 354 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 EGR1P18146 543 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 LBPP18428 481 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 NFYAP23511 347 aaPredicted RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 AZGP1P25311 298 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 HOXA9P31269 272 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 GRK5P34947 590 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 WNT5AP41221 380 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CDKN2CP42773 168 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 OR1G1P47890 313 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 RGS4P49798 205 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CCR4P51679 360 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 HCCSP53701 268 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CASP9P55211 416 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 GMFBP60983 142 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 DLK1P80370 383 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 CBFBQ13951 182 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 SERTAD2Q14140 314 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 TSNQ15631 228 aaKnown RBP5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ODF3L2Q3SX64 289 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 XKR4Q5GH76 650 aa5.33□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF667Q5HYK9 610 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms