RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 POGLUT1Q8NBL1 392 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OR2A1Q8NGT9 310 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OR1E3Q8WZA6 343 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 AP3S1Q92572 193 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 UCN3Q969E3 161 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 UBE2E3Q969T4 207 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CXorf40BQ96DE9 158 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MARS2Q96GW9 593 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 KCTD7Q96MP8 289 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 TMEM43Q9BTV4 400 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GAL3ST2Q9H3Q3 398 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 NT5DC2Q9H857 520 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MYNNQ9NPC7 610 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 LHX9Q9NQ69 397 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CLEC5AQ9NY25 188 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 KCMF1Q9P0J7 381 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 USP36Q9P275 1121 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 PADI2Q9Y2J8 665 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 SPIN1Q9Y657 262 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 RNF215Q9Y6U7 377 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 DUXAA6NLW8 204 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 PHYHO14832 338 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 SSNA1O43805 119 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 STX11O75558 287 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 EML2O95834 649 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CBX7O95931 251 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 IFNA2P01563 188 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 IFNGP01579 166 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GBAP04062 536 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 FURINP09958 794 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GPX2P18283 190 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GABRB1P18505 474 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 LCN1P31025 176 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 KCNJ3P48549 501 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 RAB28P51157 221 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GPR143P51810 404 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 EPHA4P54764 986 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 RAB8AP61006 207 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 DCAF7P61962 342 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 DEFA5Q01523 94 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GAB1Q13480 694 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 NFATC4Q14934 902 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 RPE65Q16518 533 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 EOGTQ5NDL2 527 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ATRAIDQ6UW56 229 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 HSDL2Q6YN16 418 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CXXC5Q7LFL8 322 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OVCH2Q7RTZ1 564 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 BMP8AQ7Z5Y6 402 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 SERPINA11Q86U17 422 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 PTOV1Q86YD1 416 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 FAM185AQ8N0U4 392 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ZFP41Q8N8Y5 198 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OR10H5Q8NGA6 315 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 C16orf78Q8WTQ4 265 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CREB3L1Q96BA8 519 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 EPYCQ99645 322 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MS4A8Q9BY19 250 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CHIAQ9BZP6 476 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 AICDAQ9GZX7 198 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 PCBD2Q9H0N5 130 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ABCG5Q9H222 651 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GHRLQ9UBU3 117 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 FBXL2Q9UKC9 423 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 POFUT2Q9Y2G5 429 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MYO9BQ13459 2157 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 TMEM265A0A087WTH1 108 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 FEZF1A0PJY2 475 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MPTX1A8MV57 137 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 RNASET2O00584 256 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 PLPP1O14494 284 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ARPC5O15511 151 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 KCNK5O95279 499 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 IL1AP01583 271 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 IGLV3-19P01714 112 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 AHRP35869 848 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTBP60709 375 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTA2P62736 377 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTG1P63261 375 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTG2P63267 376 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTC1P68032 377 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTA1P68133 377 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CSNK1G2P78368 415 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MC1RQ01726 317 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 MRPL49Q13405 166 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GPR176Q14439 515 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF628Q5EBL2 1059 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CPTPQ5TA50 214 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 B3GLCTQ6Y288 498 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 GDPGP1Q6ZNW5 385 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 CBLL1Q75N03 491 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ADGRF3Q8IZF5 1079 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OR52E1Q8NGJ3 308 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OR2T35Q8NGX2 323 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 ZC3HAV1LQ96H79 300 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 OR2M4Q96R27 311 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 KATNB1Q9BVA0 655 aa7.38□□□□□ -1.23
PDLIM5-221ENST00000542407 BHLHE41Q9C0J9 482 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms