RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 ZFP28Q8NHY6 868 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 RAB8BQ92930 207 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
PAAF1-211ENST00000542293 FAM120BQ96EK7 910 aaKnown RBP13.33□□□□□ -0.28
PAAF1-211ENST00000542293 KCNA7Q96RP8 456 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF382Q96SR6 550 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF385DQ9H6B1 395 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 MOV10Q9HCE1 1003 aaKnown RBP13.33□□□□□ -0.28
PAAF1-211ENST00000542293 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 KCNE5Q9UJ90 142 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 FZR1Q9UM11 496 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 WIPI2Q9Y4P8 454 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 COL7A1Q02388 2944 aa13.33□□□□□ -0.28
PAAF1-211ENST00000542293 CENPVL1A0A0U1RR11 272 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 FAM181BA6NEQ2 426 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 TRIM49D1C9J1S8 452 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 EIF1BO60739 113 aaKnown RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 GPANK1O95872 356 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 CCNA2P20248 432 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 CLK1P49759 484 aaKnown RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 SELENOPP49908 381 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 ATP4BP51164 291 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 SLC35A1P78382 337 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 GUCY2DQ02846 1103 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 UNC50Q53HI1 259 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF362Q5T0B9 420 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF771Q7L3S4 317 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 JAZF1Q86VZ6 243 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 OR9K2Q8NGE7 335 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 NAA11Q9BSU3 229 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 KRTAP17-1Q9BYP8 105 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 MMP26Q9NRE1 261 aa13.32□□□□□ -0.28
PAAF1-211ENST00000542293 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-211ENST00000542293 SERTM1A2A2V5 107 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 TMEM229AB2RXF0 380 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.28
PAAF1-211ENST00000542293 UPK3AO75631 287 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 NGFP01138 241 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 UBTFL6P0CB48 400 aaPredicted RBP13.31□□□□□ -0.28
PAAF1-211ENST00000542293 BCKDHAP12694 445 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 SERPINB8P50452 374 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 NAB1Q13506 487 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 FAM189A2Q15884 450 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 ALKBH6Q3KRA9 238 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 NOXRED1Q6NXP6 359 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 MDP1Q86V88 176 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 RETREG3Q86VR2 466 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 MRAPQ8TCY5 172 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
PAAF1-211ENST00000542293 ZCCHC3Q9NUD5 404 aaKnown RBP13.31□□□□□ -0.28
PAAF1-211ENST00000542293 C1RLQ9NZP8 487 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 LEF1Q9UJU2 399 aaPredicted RBP13.31□□□□□ -0.28
PAAF1-211ENST00000542293 PLXNB1O43157 2135 aa13.31□□□□□ -0.28
PAAF1-211ENST00000542293 PPIAL4EA0A075B759 164 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 PPIAL4CA0A0B4J2A2 164 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 NPIPB8E9PQR5 432 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 PPIAL4DF5H284 164 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 ANKRD28O15084 1053 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 BCAS1O75363 584 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-211ENST00000542293 RSL1D1O76021 490 aaKnown RBP13.3□□□□□ -0.28
PAAF1-211ENST00000542293 SUPT7LO94864 414 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 CSTAP01040 98 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 PPIAL4FP0DN26 164 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 GLRXP35754 106 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 ARR3P36575 388 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 RAD52P43351 418 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 CCL8P80075 99 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 HLXQ14774 488 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-211ENST00000542293 PAQR6Q6TCH4 344 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 GRINAQ7Z429 371 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 REC114Q7Z4M0 266 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 TMEM99Q8N816 258 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 IL17RDQ8NFM7 739 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 FAM76AQ8TAV0 307 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF764Q96H86 408 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-211ENST00000542293 MS4A7Q9GZW8 240 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-211ENST00000542293 SERHL2Q9H4I8 314 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 AUP1Q9Y679 476 aa13.3□□□□□ -0.28
PAAF1-211ENST00000542293 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-211ENST00000542293 DNAH3Q8TD57 4116 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 MDFIC2A0A1B0GVS7 189 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 FKBP2P26885 142 aaKnown RBP13.29□□□□□ -0.28
PAAF1-211ENST00000542293 STX2P32856 288 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 ARF1P84077 181 aaKnown RBP13.29□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF141Q15928 474 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 SAMD5Q5TGI4 173 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 OLIG3Q7RTU3 272 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 GLB1L3Q8NCI6 653 aaPredicted RBP13.29□□□□□ -0.28
PAAF1-211ENST00000542293 ZNF563Q8TA94 476 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 ADAMTS15Q8TE58 950 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 KTI12Q96EK9 354 aaPredicted RBP13.29□□□□□ -0.28
PAAF1-211ENST00000542293 SF3B5Q9BWJ5 86 aaKnown RBP13.29□□□□□ -0.28
PAAF1-211ENST00000542293 ACTRT3Q9BYD9 372 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 NMUR2Q9GZQ4 415 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 SH3BP4Q9P0V3 963 aa13.29□□□□□ -0.28
PAAF1-211ENST00000542293 PURGQ9UJV8 347 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms