RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 TDRD3Q9H7E2 651 aaKnown RBP4.29□□□□□ -1.72
CIT-211ENST00000541841 C8orf33Q9H7E9 229 aaPredicted RBP4.29□□□□□ -1.72
CIT-211ENST00000541841 SYNDIG1Q9H7V2 258 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 WDR41Q9HAD4 459 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 NMRAL1Q9HBL8 299 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 POPDC2Q9HBU9 364 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 MEPEQ9NQ76 525 aaPredicted RBP4.29□□□□□ -1.72
CIT-211ENST00000541841 ZNF446Q9NWS9 450 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 RCOR3Q9P2K3 495 aaPredicted RBP4.29□□□□□ -1.72
CIT-211ENST00000541841 PDE10AQ9Y233 779 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 EXOGQ9Y2C4 368 aaKnown RBP4.29□□□□□ -1.72
CIT-211ENST00000541841 OARD1Q9Y530 152 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 PEAK1Q9H792 1746 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 PARP4Q9UKK3 1724 aaKnown RBP4.29□□□□□ -1.72
CIT-211ENST00000541841 SNED1Q8TER0 1413 aa4.29□□□□□ -1.72
CIT-211ENST00000541841 CARMIL3Q8ND23 1372 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 IGHV4-4A0A075B6R2 117 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 IGHV3-20A0A0C4DH32 117 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 FRG2CA6NGY1 282 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 ERI2A8K979 691 aaKnown RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 F5H6K3 240 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 ERLIN2O94905 339 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 AP2A2O94973 939 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 OR2F2O95006 317 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 P04436 131 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 CD48P09326 243 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 WNT2P09544 360 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 CCDC172P0C7W6 258 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 UBTFL6P0CB48 400 aaPredicted RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 BCKDHAP12694 445 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 PAX1P15863 534 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 PRKACAP17612 351 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 GSTM3P21266 225 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 ANXA13P27216 316 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 GNA11P29992 359 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 CDH5P33151 784 aaPredicted RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 MAP2K2P36507 400 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 OPRL1P41146 370 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 GNPDA1P46926 289 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 EMDP50402 254 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 RPL8P62917 257 aaKnown RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 ZNF33BQ06732 778 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 KLRC3Q07444 240 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 LAGE3Q14657 143 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 MTHFSDQ2M296 383 aaKnown RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 ARMCX5Q6P1M9 558 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 APOOLQ6UXV4 268 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 NIPA1Q7RTP0 329 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 RAB42Q8N4Z0 105 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 CSGALNACT2Q8N6G5 542 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 KIR3DL3Q8N743 410 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 WDSUB1Q8N9V3 476 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 OR2T33Q8NG76 320 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 FAM76AQ8TAV0 307 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 AENQ8WTP8 325 aaKnown RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 MOCOSQ96EN8 888 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 MBOAT4Q96T53 435 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 NAPGQ99747 312 aaPredicted RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 PITPNM3Q9BZ71 974 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 ROGDIQ9GZN7 287 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 RNF41Q9H4P4 317 aaPredicted RBP4.28□□□□□ -1.72
CIT-211ENST00000541841 INPP5EQ9NRR6 644 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 MTCH1Q9NZJ7 389 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 GALPQ9UBC7 116 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 PPP1R3CQ9UQK1 317 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 SCML2Q9UQR0 700 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 PEX16Q9Y5Y5 336 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 CSNK1G3Q9Y6M4 447 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 CEP350Q5VT06 3117 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 KIF1AQ12756 1690 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 DISP2A7MBM2 1401 aa4.28□□□□□ -1.72
CIT-211ENST00000541841 PALLDQ8WX93 1383 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 MAP3K19Q56UN5 1328 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 A0A1B0GU03 582 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 IGLON5A6NGN9 336 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 C15orf61A6NNL5 157 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 SMIM1B2RUZ4 78 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 GOLGA8KD6RF30 607 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 C11orf98E9PRG8 122 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 ZNF701M0R085 212 aaPredicted RBP4.27□□□□□ -1.73
CIT-211ENST00000541841 OR2J3O76001 311 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 TMEM50AO95807 157 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 PRSS1P07477 247 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 ZNF883P0CG24 379 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 CCNB1P14635 433 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 POLR2EP19388 210 aaKnown RBP4.27□□□□□ -1.73
CIT-211ENST00000541841 KITLGP21583 273 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 HSD17B2P37059 387 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 SSR1P43307 286 aaKnown RBP4.27□□□□□ -1.73
CIT-211ENST00000541841 MNAT1P51948 309 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 CRYBA2P53672 197 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 DAOAP59103 153 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 RAB11AP62491 216 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 ST3GAL3Q11203 375 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 RAB40BQ12829 278 aa4.27□□□□□ -1.73
CIT-211ENST00000541841 PPIL2Q13356 520 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms