RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SPANXN3Q5MJ09 141 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PLEKHS1Q5SXH7 462 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM198Q66K66 360 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PLAG1Q6DJT9 500 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 GDF6Q6KF10 455 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ADAM5Q6NVV9 412 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 STEAP1BQ6NZ63 245 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 MON1BQ7L1V2 547 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 KCTD9Q7L273 389 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 C6orf120Q7Z4R8 191 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 KMT5CQ86Y97 462 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 DENND1CQ8IV53 801 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ARHGAP12Q8IWW6 846 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 C9orf40Q8IXQ3 194 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 H1FOOQ8IZA3 346 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 GABRG1Q8N1C3 465 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF664Q8N3J9 261 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TOMM5Q8N4H5 51 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 KCNRGQ8N5I3 272 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 C11orf42Q8N5U0 333 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF738Q8NE65 137 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 OR4C5Q8NGB2 326 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 OR5L1Q8NGL2 311 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 OR11L1Q8NGX0 322 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 OR14K1Q8NGZ2 314 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PCDH19Q8TAB3 1148 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 FEZF2Q8TBJ5 459 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TBCKQ8TEA7 893 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ARRDC3Q96B67 414 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 RGMAQ96B86 450 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ZNF837Q96EG3 531 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 MYEOVQ96EZ4 313 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 DTD2Q96FN9 168 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 C4orf36Q96KX1 117 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 HSPA12BQ96MM6 686 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 OR5B2Q96R09 309 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 OR2V2Q96R30 315 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TP53RKQ96S44 253 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 CLCC1Q96S66 551 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ZSCAN10Q96SZ4 725 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 P2RX7Q99572 595 aaKnown RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 NRIP2Q9BQI9 281 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM47Q9BQJ4 181 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PDCD2LQ9BRP1 358 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 FDXACB1Q9BRP7 624 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 WDR83Q9BRX9 315 aaKnown RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 NAA11Q9BSU3 229 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 LRFN3Q9BTN0 628 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 RAB33BQ9H082 229 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM117Q9H0C3 514 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 XYLT2Q9H1B5 865 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 CSNK1G1Q9HCP0 422 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 RPS10P5Q9NQ39 176 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TMEM100Q9NV29 134 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 C2orf42Q9NWW7 574 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 BARHL2Q9NY43 387 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TAS2R13Q9NYV9 303 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TAS2R5Q9NYW4 299 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 DOK5Q9P104 306 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 COPS7AQ9UBW8 275 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PLEKHB1Q9UF11 243 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PRODH2Q9UF12 536 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 CHRNA9Q9UGM1 479 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 STEAP1Q9UHE8 339 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 VAX2Q9UIW0 290 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TUBD1Q9UJT1 453 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 FOXD3Q9UJU5 478 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-218ENST00000541615 PKP3Q9Y446 797 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 INSL6Q9Y581 213 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 NME7Q9Y5B8 376 aa4.81□□□□□ -1.64
SNHG1-218ENST00000541615 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 LRRC37A3O60309 1634 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 A0A087X1B8 175 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 A0A096LPK6 155 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 A0A1W2PQ45 241 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 A0A1W2PQY0 241 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 CXorf49A8MYA2 514 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 F5H5P2 479 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 G3V3Q6 166 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 NFKBIEO00221 500 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 SLC33A1O00400 549 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 FAAHO00519 579 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 PRRG1O14668 218 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 CTDSPLO15194 276 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 TLX2O43763 284 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 EIF4E2O60573 245 aaKnown RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 SIX3O95343 332 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 KNG1P01042 644 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 IGHEP01854 428 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 SOD2P04179 222 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 SNRPCP09234 159 aaKnown RBP4.8□□□□□ -1.64
SNHG1-218ENST00000541615 HOXC6P09630 235 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 UQCRFS1P1P0C7P4 283 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 OR5H8P0DN80 308 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 SLC25A4P12235 298 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 BMP3P12645 472 aa4.8□□□□□ -1.64
SNHG1-218ENST00000541615 BCKDHAP12694 445 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms