RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 TSC22D2O75157 780 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 GP1BAP07359 652 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 FGF5P12034 268 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 GIPRP48546 466 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 MAB21L1Q13394 359 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 TPBGQ13641 420 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 IL11RAQ14626 422 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 OVCH1Q7RTY7 1134 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 GATSQ8NAP1 163 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 DHRS9Q9BPW9 319 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 MARVELD1Q9BSK0 173 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 TMEM43Q9BTV4 400 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 CNIH4Q9P003 139 aa13.99□□□□□ -0.17
CLPTM1-202ENST00000541297 CD59P13987 128 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 PPICP45877 212 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 EVX1P49640 407 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 CTBP2P56545 445 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 SPEM2Q0P670 501 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 TRA2AQ13595 282 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 OR1Q1Q15612 314 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 SNAPC1Q16533 368 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 DECR1Q16698 335 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 C3orf38Q5JPI3 329 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 RRM2BQ7LG56 351 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 PRICKLE2Q7Z3G6 844 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 OR1N1Q8NGS0 311 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 UFD1Q92890 307 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 ADIPOR1Q96A54 375 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 FAM46AQ96IP4 442 aaKnown RBP13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 LCORQ96JN0 433 aaPredicted RBP13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 COQ7Q99807 217 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 ATF6BQ99941 703 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 ORC5O43913 435 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 PIP5K1CO60331 668 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 DRD5P21918 477 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 NR0B1P51843 470 aaKnown RBP13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 ATP12AP54707 1039 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 EBPQ15125 230 aaKnown RBP13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 KLHL22Q53GT1 634 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 ESCO2Q56NI9 601 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 SLC37A3Q8NCC5 494 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 GRHL3Q8TE85 626 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 RNFT2Q96EX2 444 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 WACQ9BTA9 647 aa13.98□□□□□ -0.17
CLPTM1-202ENST00000541297 DMXL1Q9Y485 3027 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 SLC43A1O75387 559 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 GABRA5P31644 462 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 MRPL28Q13084 256 aaKnown RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ANKRD37Q7Z713 158 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 NAXDQ8IW45 347 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 PMM1Q92871 262 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 FGF11Q92914 225 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 C8orf44Q96CB5 159 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ADOQ96SZ5 270 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 KCNJ15Q99712 375 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 EDEM2Q9BV94 578 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ULBP3Q9BZM4 244 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 DNAJB12Q9NXW2 375 aaKnown RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 GPR52Q9Y2T5 361 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 SHISA3A0PJX4 238 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 NPIPB9F8W1W9 429 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 INMT-MINDY4F8WBC2 141 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ALOX12BO75342 701 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 OR5F1O95221 314 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 LALBAP00709 142 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 INPP1P49441 399 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 AGFG1P52594 562 aaKnown RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 EMP2P54851 167 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ALDH6A1Q02252 535 aaKnown RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 FGFBP1Q14512 234 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 INSL4Q14641 139 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 SLC25A30Q5SVS4 291 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 HLA-DQA1Q5Y7H0 255 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ZNF57Q68EA5 555 aaPredicted RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 WDR88Q6ZMY6 472 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 LHFPL3Q86UP9 236 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 BPHLQ86WA6 291 aaPredicted RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 NRMQ8IXM6 262 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 THAP3Q8WTV1 239 aaPredicted RBP13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 METTL21AQ8WXB1 218 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 ART5Q96L15 291 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 SPSB2Q99619 263 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 C14orf105Q9NVL8 296 aa13.97□□□□□ -0.17
CLPTM1-202ENST00000541297 TMEM129A0AVI4 362 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 FRG2CA6NGY1 282 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 FGF9P31371 208 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 GPR4P46093 362 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 EFNB1P98172 346 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 ZNF141Q15928 474 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 C1orf94Q6P1W5 598 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 C16orf47Q6ZP98 133 aaPredicted RBP13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 SLC29A4Q7RTT9 530 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 OR8H1Q8NGG4 311 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 NR4A3Q92570 626 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 AKAP1Q92667 903 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■□□□□ 9.9
CLPTM1-202ENST00000541297 CRB3Q9BUF7 120 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 TMED9Q9BVK6 235 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 PLA2G12AQ9BZM1 189 aa13.96□□□□□ -0.17
CLPTM1-202ENST00000541297 WWTR1Q9GZV5 400 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms