RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IGKV3D-15A0A087WSY6 115 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 AQP12BA6NM10 295 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 KDM4EB2RXH2 506 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-205ENST00000541169 MSTNO14793 375 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 GSC2O15499 205 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 CD8BP10966 210 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 IMPDH2P12268 514 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 TNFRSF1BP20333 461 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 MSX2P35548 267 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-205ENST00000541169 PIN1Q13526 163 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-205ENST00000541169 TRAM2Q15035 370 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 OR7A5Q15622 319 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 ABLIM2Q6H8Q1 611 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 NCCRP1Q6ZVX7 275 aaPredicted RBP16.76■□□□□ 0.27
VPS33A-205ENST00000541169 STK32CQ86UX6 486 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 AQP12AQ8IXF9 295 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 RNF113BQ8IZP6 322 aaKnown RBP16.76■□□□□ 0.27
VPS33A-205ENST00000541169 CNEP1R1Q8N9A8 125 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 ADPRHL1Q8NDY3 354 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 ROBO4Q8WZ75 1007 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 PSMG3-AS1Q96PY0 264 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 LRMDAQ9H2I8 198 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 IL1RAPQ9NPH3 570 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 A4GNTQ9UNA3 340 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 RASD1Q9Y272 281 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 KIAA1549Q9HCM3 1950 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 MED12LQ86YW9 2145 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 RELNP78509 3460 aa16.76■□□□□ 0.27
VPS33A-205ENST00000541169 USP9XQ93008 2570 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-205ENST00000541169 IGKV1D-42A0A075B6H8 117 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 AQP7P3A6NL99 342 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 TNFSF13O75888 250 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 PDE5AO76074 875 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 UMPSP11172 480 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 KIR2DL2P43627 348 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-205ENST00000541169 RPS5P46782 204 aaKnown RBP16.75■□□□□ 0.27
VPS33A-205ENST00000541169 ASCL1P50553 236 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 OTUD3Q5T2D3 398 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-205ENST00000541169 TMEM225Q6GV28 225 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 GCNT2Q8N0V5 402 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 KTI12Q96EK9 354 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-205ENST00000541169 C7orf34Q96L11 122 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 ZNF300Q96RE9 604 aaPredicted RBP16.75■□□□□ 0.27
VPS33A-205ENST00000541169 PTDSS2Q9BVG9 487 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 ASPNQ9BXN1 380 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 PLSCR4Q9NRQ2 329 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 PARPBPQ9NWS1 579 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 NDUFAF4Q9P032 175 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 JKAMPQ9P055 326 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 MED31Q9Y3C7 131 aa16.75■□□□□ 0.27
VPS33A-205ENST00000541169 LOC102725191A0A1B0GVB3 256 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 A0A1W2PRQ8 180 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 FTCDNL1E5RQL4 147 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 ACOT8O14734 319 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 LYPD3O95274 346 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 MT-ND1P03886 318 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 FABP3P05413 133 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 DGCR6Q14129 220 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 POU4F3Q15319 338 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 FAM98BQ52LJ0 330 aaKnown RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 H1FNTQ75WM6 255 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 RRM2BQ7LG56 351 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 PIWIL3Q7Z3Z3 882 aaKnown RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 KIF18BQ86Y91 864 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 ABHD3Q8WU67 409 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 TMEM239Q8WW34 195 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 TAAR8Q969N4 342 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 CCDC124Q96CT7 223 aaKnown RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 PIP5K1AQ99755 562 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 PSD2Q9BQI7 771 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 PRSS27Q9BQR3 290 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 FKRPQ9H9S5 495 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 KRCC1Q9NPI7 259 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 ELOVL5Q9NYP7 299 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 C6orf203Q9P0P8 240 aaPredicted RBP16.74■□□□□ 0.27
VPS33A-205ENST00000541169 PROCRQ9UNN8 238 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 LRRK2Q5S007 2527 aa16.74■□□□□ 0.27
VPS33A-205ENST00000541169 PCNX1Q96RV3 2341 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 THY1P04216 161 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 SEMG1P04279 462 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 HIST1H2ABP04908 130 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 AGTR1P30556 359 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 CHRNB3Q05901 458 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 FOXF2Q12947 444 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 FLOT2Q14254 428 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 CYP2R1Q6VVX0 501 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 HIST3H2AQ7L7L0 130 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 GALNT5Q7Z7M9 940 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 CDK20Q8IZL9 346 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 PIK3C3Q8NEB9 887 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 ACOT11Q8WXI4 607 aaPredicted RBP16.73■□□□□ 0.27
VPS33A-205ENST00000541169 HIST1H2ACQ93077 130 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 SLC25A36Q96CQ1 311 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 STARD4Q96DR4 205 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 CADM1Q9BY67 442 aaKnown RBP16.73■□□□□ 0.27
VPS33A-205ENST00000541169 NMNAT1Q9HAN9 279 aaPredicted RBP16.73■□□□□ 0.27
VPS33A-205ENST00000541169 NANSQ9NR45 359 aa16.73■□□□□ 0.27
VPS33A-205ENST00000541169 MRPL39Q9NYK5 338 aaKnown RBP16.73■□□□□ 0.27
VPS33A-205ENST00000541169 ZNF229Q9UJW7 825 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms