RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 KLHL24Q6TFL4 600 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 ZNF836Q6ZNA1 936 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 AAED1Q7RTV5 226 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 VRK2Q86Y07 508 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 ZIC4Q8N9L1 334 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 POMGNT2Q8NAT1 580 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 GLB1L3Q8NCI6 653 aaPredicted RBP12.36□□□□□ -0.43
SNHG1-213ENST00000540725 OR52P1PQ8NH57 321 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 FAM168AQ92567 244 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 ZBTB9Q96C00 473 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
SNHG1-213ENST00000540725 SF3B5Q9BWJ5 86 aaKnown RBP12.36□□□□□ -0.43
SNHG1-213ENST00000540725 WDR55Q9H6Y2 383 aaPredicted RBP12.36□□□□□ -0.43
SNHG1-213ENST00000540725 MANSC1Q9H8J5 431 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 SLC6A13Q9NSD5 602 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 P2RX2Q9UBL9 471 aa12.36□□□□□ -0.43
SNHG1-213ENST00000540725 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 RFXANKO14593 260 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 HDAC3O15379 428 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 WNT11O96014 354 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 BMP4P12644 408 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-213ENST00000540725 APOBEC3AP31941 199 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-213ENST00000540725 EFNA4P52798 201 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 MVDP53602 400 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 VLDLRP98155 873 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 BNIP2Q12982 314 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 LIN52Q52LA3 116 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 HIKESHIQ53FT3 197 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 CADM2Q8N3J6 435 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 C10orf105Q8TEF2 133 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 PIF1Q9H611 641 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 PMF1-BGLAPU3KQ54 211 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 DSPPQ9NZW4 1301 aa12.35□□□□□ -0.43
SNHG1-213ENST00000540725 TRPC5OSA6NMA1 111 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 BCHEP06276 602 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 CSF3P09919 207 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 ETFAP13804 333 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 ACAA2P42765 397 aaKnown RBP12.34□□□□□ -0.43
SNHG1-213ENST00000540725 COPZ1P61923 177 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 TMEM225Q6GV28 225 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 WBP2NLQ6ICG8 309 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 ABHD12BQ7Z5M8 362 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-213ENST00000540725 NANOS1Q8WY41 292 aaKnown RBP12.34□□□□□ -0.43
SNHG1-213ENST00000540725 AURKBQ96GD4 344 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-213ENST00000540725 PARD6BQ9BYG5 372 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 ADPRHL2Q9NX46 363 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 CDC42EP3Q9UKI2 254 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 PRDM4Q9UKN5 801 aa12.34□□□□□ -0.43
SNHG1-213ENST00000540725 ZNF443Q9Y2A4 671 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-213ENST00000540725 A8MVM7 634 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 KLF11O14901 512 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 FRS3O43559 492 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 KRT33AO76009 404 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 LY6HO94772 140 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 IL6P05231 212 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 KITP10721 976 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 PRG2P13727 222 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 IDO1P14902 403 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 CRATP43155 626 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 P2RY4P51582 365 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 CRISP3P54108 245 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 WDR4P57081 412 aaKnown RBP12.33□□□□□ -0.44
SNHG1-213ENST00000540725 DSTNP60981 165 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 PDCD4Q53EL6 469 aaKnown RBP12.33□□□□□ -0.44
SNHG1-213ENST00000540725 RPS26P11Q5JNZ5 115 aaPredicted RBP12.33□□□□□ -0.44
SNHG1-213ENST00000540725 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 NXNQ6DKJ4 435 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 PHC2Q8IXK0 858 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 CLIP4Q8N3C7 705 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 SLC38A5Q8WUX1 472 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 PROX1Q92786 737 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 FBXO17Q96EF6 278 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 BOD1Q96IK1 185 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 OBP2BQ9NPH6 170 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 THAP1Q9NVV9 213 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 TMEM45AQ9NWC5 275 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
SNHG1-213ENST00000540725 IGHV1-18A0A0C4DH31 117 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 ZNF587BE7ETH6 402 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 SNNO75324 88 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-213ENST00000540725 SLC22A3O75751 556 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 VAMP5O95183 116 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 ANP32DO95626 131 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 LGI1O95970 557 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 TFPTP0C1Z6 253 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 ZCCHC18P0CG32 403 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 NCF2P19878 526 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-213ENST00000540725 SELENOPP49908 381 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 LGALS3BPQ08380 585 aa12.32□□□□□ -0.44
SNHG1-213ENST00000540725 LARS2Q15031 903 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms