RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MOKQ9UQ07 419 aa10.48□□□□□ -0.73
CBX3P4-202ENST00000540428 LOC390937A0A1W2PQ73 354 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 CCDC154A6NI56 674 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 B9A039 149 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 LY6HO94772 140 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 CXCR1P25024 350 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 SERPINF1P36955 418 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 CEACAM7Q14002 265 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 GGTLC2Q14390 218 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 CHI3L2Q15782 390 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 ZSWIM7Q19AV6 140 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 TBRG1Q3YBR2 411 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 HIKESHIQ53FT3 197 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 PEX5LQ8IYB4 626 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 TMEM99Q8N816 258 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 ZNF540Q8NDQ6 660 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 MAGEE2Q8TD90 523 aaPredicted RBP10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 PKNOX2Q96KN3 472 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 SORCS2Q96PQ0 1159 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 SLC38A2Q96QD8 506 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 PANX1Q96RD7 426 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 KCNS3Q9BQ31 491 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 TMEM109Q9BVC6 243 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 TAPBPLQ9BX59 468 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 C20orf27Q9GZN8 174 aa10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 SSU72Q9NP77 194 aaKnown RBP10.47□□□□□ -0.73
CBX3P4-202ENST00000540428 A0A096LPI6 279 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 ARPC4-TTLL3A0A0A6YYG9 625 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 IGHV1-18A0A0C4DH31 117 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 LOC100289279A0A1B0GTE1 492 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 WDR91A4D1P6 747 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 CDHR4A6H8M9 788 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 A8MVM7 634 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 ZNF587BE7ETH6 402 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 KRT33AO76009 404 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 AKR7A3O95154 331 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 CRYAAP02489 173 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 PGRP06401 933 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 NR2F1P10589 423 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 APEHP13798 732 aaKnown RBP10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 HNF1AP20823 631 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 SLC1A6P48664 564 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 P2RY4P51582 365 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 VSNL1P62760 191 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 OR7A5Q15622 319 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 EFNB3Q15768 340 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 LIN52Q52LA3 116 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 FAM120AOSQ5T036 256 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 TMEM225Q6GV28 225 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 WBP2NLQ6ICG8 309 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 GPAT4Q86UL3 456 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 ARIH2OSQ8N7S6 290 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 FAM169BQ8N8A8 192 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 OR1K1Q8NGR3 316 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 MSI2Q96DH6 328 aaKnown RBP10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 AURKBQ96GD4 344 aaPredicted RBP10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 TEX37Q96LM6 180 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 SORT1Q99523 831 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 PRR14Q9BWN1 585 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 NUF2Q9BZD4 464 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 MEAF6Q9HAF1 191 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 CA10Q9NS85 328 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 CALML5Q9NZT1 146 aa10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 CRNNQ9UBG3 495 aaPredicted RBP10.46□□□□□ -0.73
CBX3P4-202ENST00000540428 DSPPQ9NZW4 1301 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 SLC35F4A4IF30 521 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 KLF11O14901 512 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 TM9SF1O15321 606 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 KRT75O95678 551 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 C1QCP02747 245 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF23P17027 643 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 CDH2P19022 906 aaPredicted RBP10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 ACAA2P42765 397 aaKnown RBP10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 PPOXP50336 477 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 SH3BGRP55822 239 aaPredicted RBP10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 COPZ1P61923 177 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 UFM1P61960 85 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 SQLEQ14534 574 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 ADIPOQQ15848 244 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 RNF220Q5VTB9 566 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 ZNF621Q6ZSS3 439 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 CREB3L2Q70SY1 520 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 SLC46A3Q7Z3Q1 461 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 GLB1L3Q8NCI6 653 aaPredicted RBP10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 OR4F15Q8NGB8 312 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 OR52P1PQ8NH57 321 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 AENQ8WTP8 325 aaKnown RBP10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 BCL2L2Q92843 193 aaPredicted RBP10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 FOXN4Q96NZ1 517 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 OR52E6Q96RD3 313 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 C19orf24Q9BVV8 132 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 LINC00470Q9BZP3 86 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 PLK3Q9H4B4 646 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 AIG1Q9NVV5 245 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 P2RX2Q9UBL9 471 aa10.45□□□□□ -0.74
CBX3P4-202ENST00000540428 RASD1Q9Y272 281 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms