RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PIGMQ9H3S5 423 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 EVA1AQ9H8M9 152 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 BCO1Q9HAY6 547 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 PLSCR4Q9NRQ2 329 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 PRDM4Q9UKN5 801 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 SLC9A8Q9Y2E8 581 aa14□□□□□ -0.17
RPAIN-206ENST00000539417 J3KTA2 159 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 MSTNO14793 375 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 IFNA14P01570 189 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 YES1P07947 543 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 CD8BP10966 210 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 HSD17B1P14061 328 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 CALB2P22676 271 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 SLC35A1P78382 337 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF613Q6PF04 617 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 C16orf89Q6UX73 402 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 NKAIN4Q8IVV8 208 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 SLC43A2Q8N370 569 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 KDM8Q8N371 416 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 SLC25A36Q96CQ1 311 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 HSH2DQ96JZ2 352 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 GLRX2Q9NS18 164 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 TAS2R1Q9NYW7 299 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 PROCRQ9UNN8 238 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 EMC9Q9Y3B6 208 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 TRAPPC13A5PLN9 417 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 CHP2O43745 196 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 PDE5AO76074 875 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 AHSA1O95433 338 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 GPIP06744 558 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 PNMTP11086 282 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 CCKARP32238 428 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 LSM11P83369 360 aaKnown RBP eCLIP13.99□□□□□ -0.17
RPAIN-206ENST00000539417 EXOC3L2Q2M3D2 409 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 SAMD4BQ5PRF9 694 aaKnown RBP13.99□□□□□ -0.17
RPAIN-206ENST00000539417 OTUD3Q5T2D3 398 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-206ENST00000539417 GTF2IRD2BQ6EKJ0 949 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 PAQR6Q6TCH4 344 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 TFAP2EQ6VUC0 442 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 C22orf34Q6ZV56 151 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 GTF2IRD2Q86UP8 949 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 MARVELD3Q96A59 401 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 SLC41A3Q96GZ6 507 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 CLPTM1LQ96KA5 538 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 MOGAT1Q96PD6 335 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 KLHL9Q9P2J3 617 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 RHCGQ9UBD6 479 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 PRSS50Q9UI38 385 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 A4GNTQ9UNA3 340 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 V9GYQ6 96 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 FREM1Q5H8C1 2179 aa13.99□□□□□ -0.17
RPAIN-206ENST00000539417 TRAV36DV7A0A075B6V5 113 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 IGKV3D-15A0A087WSY6 115 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 FFAR1O14842 300 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 ARPC2O15144 300 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 DNPH1O43598 174 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 BGLAPP02818 100 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 COX6B1P14854 86 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 SLC17A1Q14916 467 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 TMEM201Q5SNT2 666 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
RPAIN-206ENST00000539417 ZIC4Q8N9L1 334 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 MFSD8Q8NHS3 518 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 LINC01560Q8TB33 94 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 ZHX1-C8orf76Q96EF9 292 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 SPOCK3Q9BQ16 436 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 DCAF13Q9NV06 445 aaKnown RBP13.98□□□□□ -0.17
RPAIN-206ENST00000539417 RIMS3Q9UJD0 308 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 PKDREJQ9NTG1 2253 aa13.98□□□□□ -0.17
RPAIN-206ENST00000539417 AQP7P3A6NL99 342 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 KPNA4O00629 521 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-206ENST00000539417 FZD7O75084 574 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 GRPRP30550 384 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 MNAT1P51948 309 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 SLC16A1P53985 500 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 UGT2B15P54855 530 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 TAS2R41P59536 307 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 TSC22D1Q15714 1073 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 IFI44LQ53G44 452 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 EEF1A1P5Q5VTE0 462 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 PIGXQ8TBF5 258 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 TMEM255BQ8WV15 326 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 SLC7A6OSQ96CW6 309 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF385AQ96PM9 386 aaKnown RBP13.97□□□□□ -0.17
RPAIN-206ENST00000539417 NAA11Q9BSU3 229 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-206ENST00000539417 TMEM43Q9BTV4 400 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF426Q9BUY5 554 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 TAPBPLQ9BX59 468 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 GORASP2Q9H8Y8 452 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 GP6Q9HCN6 339 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 MEPEQ9NQ76 525 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-206ENST00000539417 CRIM1Q9NZV1 1036 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 FLVCR1Q9Y5Y0 555 aa13.97□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF724A8MTY0 619 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 M0R082 166 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 EIF1BO60739 113 aaKnown RBP13.96□□□□□ -0.17
RPAIN-206ENST00000539417 PRSS23O95084 383 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 OR5F1O95221 314 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 TACC2O95359 2948 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms