RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OR10H1Q9Y4A9 318 aa9.84□□□□□ -0.83
CLIP1-210ENST00000538120 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-210ENST00000538120 SHISA3A0PJX4 238 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FAM25AB3EWG3 89 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FAM25CB3EWG5 89 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FAM25GB3EWG6 89 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 LALBAP00709 142 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 SLC2A2P11168 524 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-210ENST00000538120 MTNR1AP48039 350 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FHL1Q13642 323 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 VWA2Q5GFL6 755 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 C1orf189Q5VU69 101 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 CNIH2Q6PI25 160 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 KIRREL2Q6UWL6 708 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 WDR5BQ86VZ2 330 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 KMT5CQ86Y97 462 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 Q8N402 240 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 OR13C2Q8NGS9 318 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 ZFAND1Q8TCF1 268 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF721Q8TF20 911 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 NDC1Q9BTX1 674 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 TRIM2Q9C040 744 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 HINT3Q9NQE9 182 aaKnown RBP9.83□□□□□ -0.84
CLIP1-210ENST00000538120 PILRBQ9UKJ0 227 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 ATXN7L1Q9ULK2 861 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-210ENST00000538120 SIGLEC7Q9Y286 467 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 MED31Q9Y3C7 131 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 ASXL3Q9C0F0 2248 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 A0A1B0GTQ1 180 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 TCRBV16S1A1N1A0A5B0 115 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 MAP2K3P46734 347 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 GZMKP49863 264 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 PSMD4P55036 377 aaKnown RBP9.83□□□□□ -0.84
CLIP1-210ENST00000538120 WNT4P56705 351 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 PLK5Q496M5 336 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 LCN1P1Q5VSP4 162 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FNDC7Q5VTL7 733 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 B3GLCTQ6Y288 498 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF550Q7Z398 422 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 CMIPQ8IY22 773 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 GRPEL2Q8TAA5 225 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FANK1Q8TC84 345 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 SAP25Q8TEE9 199 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 DEDD2Q8WXF8 326 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF649Q9BS31 505 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 NXF5Q9H1B4 397 aaKnown RBP9.83□□□□□ -0.84
CLIP1-210ENST00000538120 PPP1R3EQ9H7J1 279 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 FGF21Q9NSA1 209 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 SERTAD3Q9UJW9 196 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 MYO15AQ9UKN7 3530 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 SDK1Q7Z5N4 2213 aa9.83□□□□□ -0.84
CLIP1-210ENST00000538120 MEN1O00255 615 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 SOCS6O14544 535 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 DVL2O14641 736 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 OIP5O43482 229 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 HMGN1P05114 100 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 FAM157BP0CG42 384 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 LIMS3P0CW19 117 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 LIMS4P0CW20 117 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 UBL4AP11441 157 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 FBLP22087 321 aaKnown RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 HLA-DMAP28067 261 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 EVI2BP34910 448 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 RBM34P42696 430 aaKnown RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 PPICP45877 212 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 CDH11P55287 796 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ZSWIM7Q19AV6 140 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 BTBD16Q32M84 506 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 LAMTOR1Q6IAA8 161 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 GUSBP11Q6P575 273 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 LHFPL3Q86UP9 236 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 GPR135Q8IZ08 494 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 DTX3Q8N9I9 347 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 OR5H6Q8NGV6 325 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 MAFAQ8NHW3 353 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 SLC2A12Q8TD20 617 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ADIPOR1Q96A54 375 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 SLC46A1Q96NT5 459 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 NUDT9Q9BW91 350 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 HDHD5Q9BXW7 423 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 OR8D2Q9GZM6 311 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 GALNT9Q9HCQ5 603 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 PRMT8Q9NR22 394 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 SLC22A11Q9NSA0 550 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 MCUBQ9NWR8 336 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 TMEM5Q9Y2B1 443 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 EXOGQ9Y2C4 368 aaKnown RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ARID1BQ8NFD5 2236 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ARPC4-TTLL3A0A0A6YYG9 625 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 FAM183AA6NL82 134 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 CASKO14936 926 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 CSTAP01040 98 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ERP29P30040 261 aaKnown RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 HTR1FP30939 366 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 DBPQ10586 325 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 IL18Q14116 193 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 CD226Q15762 336 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ALG10BQ5I7T1 473 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 TMEM71Q6P5X7 295 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms