RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SFRP5Q5T4F7 317 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 C1orf140Q5VVS0 124 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 PAQR6Q6TCH4 344 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 LINGO2Q7L985 606 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 SPATA21Q7Z572 469 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 PIGWQ7Z7B1 504 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 GALNT5Q7Z7M9 940 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 ARMC8Q8IUR7 673 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 SLC15A3Q8IY34 581 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 OR8J3Q8NGG0 315 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 OR52E4Q8NGH9 312 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 STK35Q8TDR2 534 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 IGFBPL1Q8WX77 278 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 SLC38A4Q969I6 547 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 S100PBPQ96BU1 408 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 LRRC46Q96FV0 321 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 ACTR6Q9GZN1 396 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 FAM53CQ9NYF3 392 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 B3GAT1Q9P2W7 334 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 PRDM4Q9UKN5 801 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 CORO2BQ9UQ03 480 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 FLVCR1Q9Y5Y0 555 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 SPIN1Q9Y657 262 aaPredicted RBP7.42□□□□□ -1.22
SPARC-208ENST00000538026 CAPN7Q9Y6W3 813 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 NSD1Q96L73 2696 aaPredicted RBP7.42□□□□□ -1.22
SPARC-208ENST00000538026 ARFGEF3Q5TH69 2177 aa7.42□□□□□ -1.22
SPARC-208ENST00000538026 A0A087WUJ7 227 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 TMEM247A6NEH6 219 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 AQP7P3A6NL99 342 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 BBIP1A8MTZ0 92 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 MS4A18H0YCH9 400 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 NME4O00746 187 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 SLC22A2O15244 555 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 LYZL6O75951 148 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 ATE1O95260 518 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 HPRP00739 348 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 NPPAP01160 153 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 BGLAPP02818 100 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 ITGA5P08648 1049 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 IDUAP35475 653 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 RPS5P46782 204 aaKnown RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 LSM11P83369 360 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPARC-208ENST00000538026 TAB1Q15750 504 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 MS4A18Q3C1V0 323 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 OTUD3Q5T2D3 398 aaPredicted RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 TSPO2Q5TGU0 170 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 Q6ZT83 130 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 CREB3L2Q70SY1 520 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 TSEN54Q7Z6J9 526 aaKnown RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 KRT73Q86Y46 540 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 KRTAP1-3Q8IUG1 177 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 ZNF433Q8N7K0 673 aaPredicted RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 OR9K2Q8NGE7 335 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 LILRB1Q8NHL6 650 aaPredicted RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 MFSD8Q8NHS3 518 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 RP9Q8TA86 221 aaKnown RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 DDIT4LQ96D03 193 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 REXO5Q96IC2 774 aaKnown RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 MOGAT1Q96PD6 335 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 ZNF607Q96SK3 696 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 PRSS27Q9BQR3 290 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 TMEM204Q9BSN7 226 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 MED18Q9BUE0 208 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 TRIM2Q9C040 744 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 PCDHAC1Q9H158 963 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 C12orf10Q9HB07 376 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 SLC7A10Q9NS82 523 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 CCM2LQ9NUG4 571 aaPredicted RBP7.41□□□□□ -1.22
SPARC-208ENST00000538026 NPAP1Q9NZP6 1156 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 NDRG3Q9UGV2 375 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 ST6GALNAC2Q9UJ37 374 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 PLEKHA6Q9Y2H5 1048 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 GPR52Q9Y2T5 361 aa7.41□□□□□ -1.22
SPARC-208ENST00000538026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 GMNCA6NCL1 334 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 PRORSD1PA6NEY8 169 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 DPRXA6NFQ7 191 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 AIM2O14862 343 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 EIF1BO60739 113 aaKnown RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 FMO6PO60774 539 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 SHOX2O60902 331 aaPredicted RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 SERPINB7O75635 380 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ZNF432O94892 652 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 GPIP06744 558 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 C8BP07358 591 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 PNMTP11086 282 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 HLA-DOBP13765 273 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 CD53P19397 219 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 CBLP22681 906 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 GRPRP30550 384 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 RGS8P57771 180 aaPredicted RBP7.4□□□□□ -1.22
SPARC-208ENST00000538026 COPZ1P61923 177 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 SLC25A3Q00325 362 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ITGADQ13349 1161 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 VEZF1Q14119 521 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 P2RY6Q15077 328 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ALG10BQ5I7T1 473 aa7.4□□□□□ -1.22
SPARC-208ENST00000538026 ENTPD8Q5MY95 495 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms