RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 PPIEQ9UNP9 301 aaKnown RBP10.85□□□□□ -0.67
CLIP1-208ENST00000537004 CELSR2Q9HCU4 2923 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 A0A1B0GWA3 101 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 KPNA4O00629 521 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 CHP2O43745 196 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ITGA10O75578 1167 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 IFI30P13284 250 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 MAKP20794 623 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 MST1P26927 711 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 VBP1P61758 197 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 PRKCDQ05655 676 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF324BQ6AW86 544 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 RPUSD3Q6P087 351 aaKnown RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 GALNTL5Q7Z4T8 443 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 CMIPQ8IY22 773 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 OR4Q3Q8NH05 313 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 OR4C3Q8NH37 302 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 TBC1D15Q8TC07 691 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 SLC2A12Q8TD20 617 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 RPL3LQ92901 407 aaKnown RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 EFHD2Q96C19 240 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 VMP1Q96GC9 406 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 OR5M11Q96RB7 305 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 TEX12Q9BXU0 123 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 TRIM2Q9C040 744 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 TSPAN10Q9H1Z9 355 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ABI3Q9P2A4 366 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 IL20RAQ9UHF4 553 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 GPR52Q9Y2T5 361 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 CPAMD8Q8IZJ3 1885 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 M0R3G1 203 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 WWP2O00308 870 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF354AO60765 605 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 SLC25A12O75746 678 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 OR2J2O76002 312 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 AGFG2O95081 481 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 CH25HO95992 272 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 IGKV3-11P04433 115 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 PPICP45877 212 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 NCS1P62166 190 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 MED22Q15528 200 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 PGGHGQ32M88 737 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ARMCX4Q5H9R4 360 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF550Q7Z398 422 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 SLC46A3Q7Z3Q1 461 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 MDGA2Q7Z553 956 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 CYP4Z2PQ8N1L4 340 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 LSMEM1Q8N8F7 131 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 OR2T33Q8NG76 320 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ZNF721Q8TF20 911 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 DAZLQ92904 295 aaKnown RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 BPIFA2Q96DR5 249 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 SAMD8Q96LT4 415 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 SLX1AQ9BQ83 275 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 PAIP2BQ9ULR5 123 aaKnown RBP10.84□□□□□ -0.67
CLIP1-208ENST00000537004 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 MED31Q9Y3C7 131 aa10.84□□□□□ -0.67
CLIP1-208ENST00000537004 ZGRF1Q86YA3 2104 aa10.83□□□□□ -0.67
CLIP1-208ENST00000537004 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 SERINC4A6NH21 518 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 EFCAB9A8MZ26 197 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 SURF4O15260 269 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 PRODHO43272 600 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 AIREO43918 545 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 CLPXO76031 633 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 CSTAP01040 98 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 HSMCR30P0CW71 290 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 FUT1P19526 365 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 CYB561P49447 251 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 RGS6P49758 472 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 CBX3Q13185 183 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 NDUFAF6Q330K2 333 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 HSDL2Q6YN16 418 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 ZBTB46Q86UZ6 589 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 CDK20Q8IZL9 346 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 SLC34A3Q8N130 599 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 C7orf57Q8NEG2 295 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 ANKK1Q8NFD2 765 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 OR14A16Q8NHC5 309 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 LGALS12Q96DT0 336 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 PLEKHA8Q96JA3 519 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 HS6ST2Q96MM7 605 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 MGLLQ99685 303 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 NXF5Q9H1B4 397 aaKnown RBP10.83□□□□□ -0.68
CLIP1-208ENST00000537004 OR52D1Q9H346 318 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 HHATLQ9HCP6 504 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 MEPEQ9NQ76 525 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-208ENST00000537004 CFL2Q9Y281 166 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 ERGIC3Q9Y282 383 aa10.83□□□□□ -0.68
CLIP1-208ENST00000537004 SNTNA6NMZ2 147 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 KDM4EB2RXH2 506 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-208ENST00000537004 ZFAND5O76080 213 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 SP1P08047 785 aa10.82□□□□□ -0.68
CLIP1-208ENST00000537004 GADD45AP24522 165 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms