RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZNF85Q03923 595 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 DNASE1L3Q13609 305 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 GLYR1Q49A26 553 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 DMKNQ6E0U4 476 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 FAAH2Q6GMR7 532 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 FAM131AQ6UXB0 335 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 LAX1Q8IWV1 398 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 OR8H2Q8N162 312 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 CYB561A3Q8NBI2 242 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 NPEPL1Q8NDH3 523 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SDR9C7Q8NEX9 313 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 OR6S1Q8NH40 331 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 OR8K3Q8NH51 312 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 STT3BQ8TCJ2 826 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TMEM234Q8WY98 164 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 EDAQ92838 391 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 ARSGQ96EG1 525 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 MED30Q96HR3 178 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SNX18Q96RF0 628 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 DDOQ99489 341 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 ISG20L2Q9H9L3 353 aaKnown RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 YARS2Q9Y2Z4 477 aaKnown RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TRAV36DV7A0A075B6V5 113 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 GNB5O14775 395 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 OGG1O15527 345 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TRIM3O75382 744 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 SLC25A12O75746 678 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 DLGAP3O95886 979 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 HEXBP07686 556 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SPI1P17947 270 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 ABCD3P28288 659 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 UQCRC1P31930 480 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 POLR2HP52434 150 aaKnown RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 ZNF117Q03924 483 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 DMWDQ09019 674 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 RIN1Q13671 783 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 HSPB2Q16082 182 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 NKAIN1Q4KMZ8 207 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 C6orf183Q5T699 404 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 C1orf189Q5VU69 101 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 PEAR1Q5VY43 1037 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 SLC6A19Q695T7 634 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 VASNQ6EMK4 673 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 RPL22L1Q6P5R6 122 aaKnown RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 TMEM91Q6ZNR0 172 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TRILQ7L0X0 811 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SLC35F2Q8IXU6 374 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 ZFP41Q8N8Y5 198 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 OR5L2Q8NGL0 311 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 CEP76Q8TAP6 659 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SNX33Q8WV41 574 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 HPS1Q92902 700 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 LMF1Q96S06 567 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TIMP4Q99727 224 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TTYH2Q9BSA4 534 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 LRRN3Q9H3W5 708 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 RERGLQ9H628 205 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 C19orf25Q9UFG5 118 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 GRIP1Q9Y3R0 1128 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 COL5A1P20908 1838 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 J3QLW9 94 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 SEC14L5O43304 696 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 TACSTD2P09758 323 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 ZNF19P17023 458 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 GTF2E2P29084 291 aaKnown RBP12.37□□□□□ -0.43
SMG6-203ENST00000536871 TGM4P49221 684 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 MAP2K6P52564 334 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 BLVRAP53004 296 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 HBMQ6B0K9 141 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 COX15Q7KZN9 410 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 MAMDC2Q7Z304 686 aaPredicted RBP12.37□□□□□ -0.43
SMG6-203ENST00000536871 GRINAQ7Z429 371 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 SNX29P2Q8IUI4 249 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 LRRC75AQ8NAA5 344 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 GATSQ8NAP1 163 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 FAM83FQ8NEG4 500 aaPredicted RBP12.37□□□□□ -0.43
SMG6-203ENST00000536871 OR2T4Q8NH00 348 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 TBX5Q99593 518 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 SDHCQ99643 169 aaPredicted RBP12.37□□□□□ -0.43
SMG6-203ENST00000536871 GRHPRQ9UBQ7 328 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 NPFFR2Q9Y5X5 522 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 CEP192Q8TEP8 1941 aa12.37□□□□□ -0.43
SMG6-203ENST00000536871 SPAG17Q6Q759 2223 aa12.36□□□□□ -0.43
SMG6-203ENST00000536871 TRAV1-2A0A0B4J238 106 aa12.36□□□□□ -0.43
SMG6-203ENST00000536871 ZC3H12DA2A288 527 aaKnown RBP12.36□□□□□ -0.43
SMG6-203ENST00000536871 CPED1A4D0V7 1026 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms