RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ENKD1Q9H0I2 346 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 PRSS38A1L453 326 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 E9PI62 339 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
LIG1-203ENST00000536218 ICOSLGO75144 302 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 SNRNP200O75643 2136 aaKnown RBP12.89□□□□□ -0.35
LIG1-203ENST00000536218 ZNF35P13682 527 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 ELAVL4P26378 380 aaKnown RBP12.89□□□□□ -0.35
LIG1-203ENST00000536218 ACTR1BP42025 376 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 ACTR1AP61163 376 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 DEFA6Q01524 100 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 DHODHQ02127 395 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 LCN9Q8WX39 176 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 AICDAQ9GZX7 198 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 FN3KQ9H479 309 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 NPDC1Q9NQX5 325 aaPredicted RBP12.89□□□□□ -0.35
LIG1-203ENST00000536218 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 METTL21EPA6NDL7 271 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 H1F0P07305 194 aaKnown RBP12.89□□□□□ -0.35
LIG1-203ENST00000536218 UQCRC2P22695 453 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 MICBQ29980 383 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 KLHL26Q53HC5 615 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 ARL9Q6T311 187 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 C6orf120Q7Z4R8 191 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 WDSUB1Q8N9V3 476 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
LIG1-203ENST00000536218 PRODHO43272 600 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 RGS9O75916 674 aaPredicted RBP12.88□□□□□ -0.35
LIG1-203ENST00000536218 NFYBP25208 207 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 MAP4K2Q12851 820 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 OR2B11Q5JQS5 317 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 H3F3CQ6NXT2 135 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 OR4D9Q8NGE8 314 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 OR5D16Q8NGK9 328 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 MRGPRX1Q96LB2 322 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 SLC25A32Q9H2D1 315 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 SYNPO2LQ9H987 977 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 CBLCQ9ULV8 474 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 ENTPD4Q9Y227 616 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 CKAP5Q14008 2032 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 MYO15AQ9UKN7 3530 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 MEX3AA1L020 520 aaKnown RBP12.88□□□□□ -0.35
LIG1-203ENST00000536218 GPR89AB7ZAQ6 455 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 C4orf51C9J302 202 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 FMO6PO60774 539 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 B4GALT2O60909 372 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 GPR89BP0CG08 455 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 PRF1P14222 555 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 CNR1P21554 472 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 CSF2RBP32927 897 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 CDH11P55287 796 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
LIG1-203ENST00000536218 AGERQ15109 404 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 ZNF542PQ5EBM4 170 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 HACD4Q5VWC8 232 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 APOOLQ6UXV4 268 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 CMIPQ8IY22 773 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 ZSCAN1Q8NBB4 408 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 OR2M4Q96R27 311 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 GABRG3Q99928 467 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 ASF1BQ9NVP2 202 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 EPHA6Q9UF33 1036 aa12.88□□□□□ -0.35
LIG1-203ENST00000536218 A0A1W2PS29 197 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 TMEM218A2RU14 115 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 PRAF2O60831 178 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 KHDRBS3O75525 346 aaKnown RBP12.87□□□□□ -0.35
LIG1-203ENST00000536218 GPX4P36969 197 aaPredicted RBP12.87□□□□□ -0.35
LIG1-203ENST00000536218 GAS1P54826 345 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 GMFBP60983 142 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 SORDQ00796 357 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 ALKBH1Q13686 389 aaKnown RBP12.87□□□□□ -0.35
LIG1-203ENST00000536218 EIF2S3LQ2VIR3 472 aaKnown RBP12.87□□□□□ -0.35
LIG1-203ENST00000536218 SLC36A4Q6YBV0 504 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 MTSS1LQ765P7 747 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 OR2L3Q8NG85 312 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 OR2L8Q8NGY9 312 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 SLC7A13Q8TCU3 470 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 SLC38A5Q8WUX1 472 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 ZFPM2Q8WW38 1151 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 OR5P2Q8WZ92 322 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 BBS4Q96RK4 519 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
LIG1-203ENST00000536218 MKL2Q9ULH7 1088 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 ANGPT4Q9Y264 503 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 CHST10O43529 356 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 UBL3O95164 117 aa12.87□□□□□ -0.35
LIG1-203ENST00000536218 PEBP1P30086 187 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms