RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MEAF6Q9HAF1 191 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 CA10Q9NS85 328 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 TMEM45AQ9NWC5 275 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 RCE1Q9Y256 329 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 FKBP7Q9Y680 259 aa9.77□□□□□ -0.85
CLSTN3-206ENST00000535668 TMEM72A0PK05 275 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 ZC3H12DA2A288 527 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 CLDN24A6NM45 220 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 A8MVM7 634 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 TMEM229AB2RXF0 380 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 FTCDNL1E5RQL4 147 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 E9PBE3 544 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 M0R1B8 84 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 SKAP2O75563 359 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 CHRM4P08173 479 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 SOAT1P35610 550 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 EVX1P49640 407 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 RNF144AP50876 292 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 OR2B6P58173 313 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 ADIPOQQ15848 244 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 SPANXN4Q5MJ08 99 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 FAM120AOSQ5T036 256 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 PRAMEF8Q5VWM4 474 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 PRAMEF7Q5VXH5 474 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 ANKRD16Q6P6B7 361 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 C6orf89Q6UWU4 347 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 CASP12Q6UXS9 341 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 CREB3L2Q70SY1 520 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 CLEC4FQ8N1N0 589 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 MREGQ8N565 214 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 IL17RDQ8NFM7 739 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 OR1K1Q8NGR3 316 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 OR2W6PQ8NHA6 318 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 STK35Q8TDR2 534 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 ZFAND2BQ8WV99 257 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 RAB8BQ92930 207 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF385AQ96PM9 386 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 SORCS2Q96PQ0 1159 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 SLC38A2Q96QD8 506 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 SLC35A5Q9BS91 424 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 PIMREGQ9BSJ6 248 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 C20orf27Q9GZN8 174 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 NELFAQ9H3P2 528 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 C12orf10Q9HB07 376 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 ARGLU1Q9NWB6 273 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 THUMPD1Q9NXG2 353 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 UPB1Q9UBR1 384 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 MARCOQ9UEW3 520 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 RASD1Q9Y272 281 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 GMEB1Q9Y692 573 aa9.76□□□□□ -0.85
CLSTN3-206ENST00000535668 IGHV1-18A0A0C4DH31 117 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 ATP6V1G2-DDX39BF2Z307 99 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 AP3D1O14617 1153 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 TM9SF1O15321 606 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 CYP7B1O75881 506 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 CRYAAP02489 173 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 PGRP06401 933 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 TFPTP0C1Z6 253 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 SRD5A1P18405 259 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 LBPP18428 481 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 PTNP21246 168 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 RYKP34925 604 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 IDH3GP51553 393 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 ABCE1P61221 599 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 SNRPD2P62316 118 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 HPCAP84074 193 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 NAAAQ02083 359 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 TBRG1Q3YBR2 411 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 FAM174BQ3ZCQ3 159 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 OTUD3Q5T2D3 398 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 MRPL2Q5T653 305 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 WBP2NLQ6ICG8 309 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 TNFAIP8L2Q6P589 184 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 C5orf46Q6UWT4 87 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 MSANTD1Q6ZTZ1 278 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 OLIG3Q7RTU3 272 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 AAED1Q7RTV5 226 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 EPHX4Q8IUS5 362 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 NUDCD3Q8IVD9 361 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 RFLNBQ8N5W9 214 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 TMEM99Q8N816 258 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 ZNF781Q8N8C0 355 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 ANKFN1Q8N957 763 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 MFSD8Q8NHS3 518 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 AGR3Q8TD06 166 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 AENQ8WTP8 325 aaKnown RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 NEU4Q8WWR8 484 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 DOK1Q99704 481 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 MANSC1Q9H8J5 431 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 BCL2L10Q9HD36 194 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 CALML5Q9NZT1 146 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 KCNS2Q9ULS6 477 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 GPR45Q9Y5Y3 372 aa9.75□□□□□ -0.85
CLSTN3-206ENST00000535668 A0A0A6YYJ9 748 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 IGHV4-61A0A0C4DH41 118 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 TLDC2A0PJX2 215 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 SLC35F4A4IF30 521 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 CCDC154A6NI56 674 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 SMIM23A6NLE4 172 aa9.74□□□□□ -0.85
CLSTN3-206ENST00000535668 SLCO1B7G3V0H7 640 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms