RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 A8MV72 311 aaPredicted RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 H3BMH7 237 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 ZNF264O43296 627 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 LYRM1O43325 122 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 SELENOFO60613 162 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 EIF4EP06730 217 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 PSKH1P11801 424 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 TALDO1P37837 337 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 GDI2P50395 445 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 EPHA4P54764 986 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 SF3A2Q15428 464 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 SLC25A35Q3KQZ1 300 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 TBRG1Q3YBR2 411 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 SLC35D3Q5M8T2 416 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 PRAMEF17Q5VTA0 474 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 SDR16C5Q8N3Y7 309 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 OR4M1Q8NGD0 313 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 OR6K6Q8NGW6 343 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 OIT3Q8WWZ8 545 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 LCORQ96JN0 433 aaPredicted RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 HSPA12BQ96MM6 686 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 ADOQ96SZ5 270 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 PCED1AQ9H1Q7 454 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 NCDNQ9UBB6 729 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 TMEM131Q92545 1883 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 FAM240BA0A1B0GVZ2 78 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 PAHP00439 452 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 RAB3BP20337 219 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 NPR2P20594 1047 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 CDKN2AP42771 156 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 HSD11B2P80365 405 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 ZNF74Q16587 644 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 SNAP47Q5SQN1 464 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 CAPSLQ8WWF8 208 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 SMIM19Q96E16 107 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 ZC3HAV1LQ96H79 300 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 Q96M85 177 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 OR1F2PQ96R84 312 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 HDHD2Q9H0R4 259 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 EXOSC3Q9NQT5 275 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 NANSQ9NR45 359 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 DDX28Q9NUL7 540 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 NUFIP1Q9UHK0 495 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 MRTO4Q9UKD2 239 aaKnown RBP12.64□□□□□ -0.39
NEK4-207ENST00000535191 COPS3Q9UNS2 423 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 NPFFR2Q9Y5X5 522 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 PRUNE2Q8WUY3 3088 aa12.64□□□□□ -0.39
NEK4-207ENST00000535191 TRAV1-2A0A0B4J238 106 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 TRBV2A0A0J9YWF9 115 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 TEX13CA0A0J9YWL9 993 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 A0A1B0GVC2 190 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 A6NIN4 97 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 SERPINI2O75830 405 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 IGF2P01344 180 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 IGKV3-11P04433 115 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 EDNRAP25101 427 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 ZNF57Q68EA5 555 aaPredicted RBP12.63□□□□□ -0.39
NEK4-207ENST00000535191 LEG1Q6P5S2 330 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 UTS2BQ765I0 119 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 GLCCI1Q86VQ1 547 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 PRR22Q8IZ63 422 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 UBASH3BQ8TF42 649 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 LIPHQ8WWY8 451 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 MOGAT1Q96PD6 335 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
NEK4-207ENST00000535191 WACQ9BTA9 647 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 FOXQ1Q9C009 403 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 NLKQ9UBE8 527 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
NEK4-207ENST00000535191 IGKV3D-11A0A0A0MRZ8 115 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 A0A0B4J293 547 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 FRG2CA6NGY1 282 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 FAM171A2A8MVW0 826 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 GLCEO94923 617 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 DDAH2O95865 285 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 PITPNBP48739 271 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 CTXN1P60606 82 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 IL10RAQ13651 578 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 Q8N9G6 341 aaPredicted RBP12.63□□□□□ -0.39
NEK4-207ENST00000535191 OR1L3Q8NH93 324 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 ZNF563Q8TA94 476 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 C1orf216Q8TAB5 229 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
NEK4-207ENST00000535191 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 SLC7A6Q92536 515 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 ADIPOR1Q96A54 375 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 RNF31Q96EP0 1072 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 MVB12AQ96EY5 273 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
NEK4-207ENST00000535191 DMRTB1Q96MA1 342 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 GAL3ST4Q96RP7 486 aa12.63□□□□□ -0.39
NEK4-207ENST00000535191 UBE2ZQ9H832 354 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms