RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 FOXN4Q96NZ1 517 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 COL21A1Q96P44 957 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ERMAPQ96PL5 475 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 KCNA7Q96RP8 456 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CSF3RQ99062 836 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 EBNA1BP2Q99848 306 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PRRT1Q99946 306 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MGME1Q9BQP7 344 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 EBF4Q9BQW3 602 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 REEP2Q9BRK0 252 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 LXNQ9BS40 222 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TRIM51Q9BSJ1 452 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MRPL13Q9BYD1 178 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ACTR6Q9GZN1 396 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NAA50Q9GZZ1 169 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PPIL3Q9H2H8 161 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NMNAT1Q9HAN9 279 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 C3orf14Q9HBI5 128 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CCNB1IP1Q9NPC3 277 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ZDHHC4Q9NPG8 344 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 EIF2B3Q9NR50 452 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 SIRT7Q9NRC8 400 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 FBXO6Q9NRD1 293 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TREX1Q9NSU2 369 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ECHDC1Q9NTX5 307 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ZFP57Q9NU63 452 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ACSS1Q9NUB1 689 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TBC1D13Q9NVG8 400 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NLE1Q9NVX2 485 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 DUS2Q9NX74 493 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 PLEK2Q9NYT0 353 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 USE1Q9NZ43 259 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NINJ2Q9NZG7 142 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TMEM181Q9P2C4 612 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ERRFI1Q9UJM3 462 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ADAM28Q9UKQ2 775 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 STUB1Q9UNE7 303 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 MOKQ9UQ07 419 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 TMEM184BQ9Y519 407 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 NFASCO94856 1347 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 FAM205AQ6ZU69 1335 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ZNFX1Q9P2E3 1918 aaKnown RBP3.85□□□□□ -1.79
ITGB1-219ENST00000534049 CASP8AP2Q9UKL3 1982 aa3.85□□□□□ -1.79
ITGB1-219ENST00000534049 ZSWIM8A7E2V4 1837 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 GLYATL1P3A0A0U1RQE8 302 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SLC5A10A0PJK1 596 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 TMEM218A2RU14 115 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 TRAPPC13A5PLN9 417 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 WASHC1A8K0Z3 465 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 HSPB2A8KAH6 182 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 PRAC2D3DTV9 90 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 D6RAR5 112 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 NPIPB11E5RHQ5 1161 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 TLR4O00206 839 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 BHLHE40O14503 412 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 IMPA2O14732 288 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 PDCD5O14737 125 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 BCAT2O15382 392 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 CFLARO15519 480 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 CHST10O43529 356 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ORC5O43913 435 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ZIC3O60481 467 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 GLRA3O75311 464 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 C22orf31O95567 290 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 AK1P00568 194 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ADRB2P07550 413 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 G6PDP11413 515 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SPNP16150 400 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 TYMPP19971 482 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 CD72P21854 359 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 LHCGRP22888 699 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 STOMP27105 288 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 S100A2P29034 98 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SSTR2P30874 369 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 RPA3P35244 121 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 PTGFRP43088 359 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 CAPZBP47756 277 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 QARSP47897 775 aaKnown RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 LUMP51884 338 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 CDH11P55287 796 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 CLDN8P56748 225 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ACTBP60709 375 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 RRAS2P62070 204 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ACTA2P62736 377 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 RBX1P62877 108 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 FKBP1AP62942 108 aaKnown RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 EIF5AP63241 154 aaKnown RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ACTG1P63261 375 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ACTG2P63267 376 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ACTC1P68032 377 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ACTA1P68133 377 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 DCDP81605 110 aaKnown RBP3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SP3Q02447 781 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 GABPAQ06546 454 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 ELP6Q0PNE2 266 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 RASGEF1BQ0VAM2 473 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SREBF2Q12772 1141 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 TWF1Q12792 350 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SPP2Q13103 211 aa3.84□□□□□ -1.79
ITGB1-219ENST00000534049 SCGB2A2Q13296 93 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms