RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 LRRC46Q96FV0 321 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 ZC3HAV1LQ96H79 300 aaKnown RBP11.88□□□□□ -0.51
CMTM1-219ENST00000533953 CDRT15Q96T59 188 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 NAA11Q9BSU3 229 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-219ENST00000533953 TAPBPLQ9BX59 468 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 ABCD2Q9UBJ2 740 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 FOXD3Q9UJU5 478 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-219ENST00000533953 SLC7A7Q9UM01 511 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 ADGRG4Q8IZF6 3080 aa11.88□□□□□ -0.51
CMTM1-219ENST00000533953 B2RBV5 119 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 KPNA4O00629 521 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-219ENST00000533953 ADAP00813 363 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 SERPINA1P01009 418 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 T-ENOLP0DO92 83 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 PNMTP11086 282 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 UGT2B10P36537 528 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 MAP2K6P52564 334 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 FOXG1P55316 489 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-219ENST00000533953 SELENOWP63302 87 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 MXRA7P84157 204 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 PIN1Q13526 163 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-219ENST00000533953 SLC17A1Q14916 467 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 POU4F3Q15319 338 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 FAM91A1Q658Y4 838 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 GDF7Q7Z4P5 450 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 GALNT5Q7Z7M9 940 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 GPAT4Q86UL3 456 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 CXorf67Q86X51 503 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-219ENST00000533953 ZIC4Q8N9L1 334 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 BCAS4Q8TDM0 211 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 NRGNQ92686 78 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 NSL1Q96IY1 281 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF385AQ96PM9 386 aaKnown RBP11.87□□□□□ -0.51
CMTM1-219ENST00000533953 SPAG4Q9NPE6 437 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 RHCGQ9UBD6 479 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 BAG5Q9UL15 447 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 AP3M1Q9Y2T2 418 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
CMTM1-219ENST00000533953 FBN2P35556 2912 aa11.87□□□□□ -0.51
CMTM1-219ENST00000533953 ABCA12Q86UK0 2595 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 IGKV3D-15A0A087WSY6 115 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 SH3D21A4FU49 640 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 TRAPPC13A5PLN9 417 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF724A8MTY0 619 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 C16orf97H3BN30 126 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 J3KTA2 159 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 M0R082 166 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
CMTM1-219ENST00000533953 FMO6PO60774 539 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 IFNA14P01570 189 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 GGT1P19440 569 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 GRPRP30550 384 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 OR3A2P47893 321 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 LSM11P83369 360 aaKnown RBP eCLIP11.86□□□□□ -0.51
CMTM1-219ENST00000533953 LGALS3BPQ08380 585 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 TMEM225Q6GV28 225 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 GLYATQ6IB77 296 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF613Q6PF04 617 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 PAQR6Q6TCH4 344 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 LINC00114Q6XXX2 140 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 NKAIN4Q8IVV8 208 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF100Q8IYN0 542 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 DEFB107AQ8IZN7 70 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 GABRG1Q8N1C3 465 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 C10orf53Q8N6V4 93 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 FAM86B1Q8N7N1 296 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 MFSD8Q8NHS3 518 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF417Q8TAU3 575 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 PIGXQ8TBF5 258 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 FAM162AQ96A26 154 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 SLC41A3Q96GZ6 507 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 MOGAT1Q96PD6 335 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ZNF587Q96SQ5 575 aaPredicted RBP11.86□□□□□ -0.51
CMTM1-219ENST00000533953 PRSS27Q9BQR3 290 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 AMBRA1Q9C0C7 1298 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 PCDHAC1Q9H158 963 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 C12orf10Q9HB07 376 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 GP6Q9HCN6 339 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ELOVL5Q9NYP7 299 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 KCNN3Q9UGI6 736 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 RIMS3Q9UJD0 308 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 PRDM4Q9UKN5 801 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 SLC9A8Q9Y2E8 581 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 FLVCR1Q9Y5Y0 555 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 ITPR2Q14571 2701 aa11.86□□□□□ -0.51
CMTM1-219ENST00000533953 TRAV36DV7A0A075B6V5 113 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 AQP7P3A6NL99 342 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 DNPH1O43598 174 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 HPRP00739 348 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 BGLAPP02818 100 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 EPXP11678 715 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 SLC16A1P53985 500 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 TAS2R41P59536 307 aa11.85□□□□□ -0.51
CMTM1-219ENST00000533953 SORDQ00796 357 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms