RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 IRF8Q02556 426 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ARL16Q0P5N6 197 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 SCARB2Q14108 478 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 SERTAD2Q14140 314 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 SIX1Q15475 284 aaPredicted RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 FAM83EQ2M2I3 478 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 LBHQ53QV2 105 aaPredicted RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 XKR6Q5GH73 641 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ANKRD22Q5VYY1 191 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 TTC19Q6DKK2 380 aaPredicted RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 CLEC18BQ6UXF7 455 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 FOXL2NBQ6ZUU3 175 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 C9orf139Q6ZV77 190 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 COX15Q7KZN9 410 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 PLD3Q8IV08 490 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 GPALPP1Q8IXQ4 340 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ZBED8Q8IZ13 594 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 CDK20Q8IZL9 346 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 SLC35F6Q8N357 371 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 NKAIN3Q8N8D7 197 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 THAP8Q8NA92 274 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 NPEPL1Q8NDH3 523 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 SETD6Q8TBK2 473 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 CD200R1Q8TD46 325 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ZNF473Q8WTR7 871 aaKnown RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 EXT2Q93063 718 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 PYCR2Q96C36 320 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 TM4SF19Q96DZ7 209 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ARSGQ96EG1 525 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ST6GAL2Q96JF0 529 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ART5Q96L15 291 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 C10orf90Q96M02 699 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 RAB3IPQ96QF0 476 aaPredicted RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 INTS14Q96SY0 518 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 NDNQ99608 321 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 NRTNQ99748 197 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 LRRC1Q9BTT6 524 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 EFCAB11Q9BUY7 163 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 NT5DC2Q9H857 520 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 POPDC3Q9HBV1 291 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 DNAJC4Q9NNZ3 241 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 RAB9BQ9NP90 201 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 PRTFDC1Q9NRG1 225 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 DNAJC11Q9NVH1 559 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 HPF1Q9NWY4 346 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 DNAJB9Q9UBS3 223 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 MTRF1LQ9UGC7 380 aaKnown RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 PSME2Q9UL46 239 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 NPIPA1Q9UND3 350 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 CHMP2BQ9UQN3 213 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 SLC22A14Q9Y267 594 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 KCNK7Q9Y2U2 307 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 YARS2Q9Y2Z4 477 aaKnown RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 MMACHCQ9Y4U1 282 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
CASP4-211ENST00000533252 LRRK2Q5S007 2527 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 LOC400499M0QZD8 3231 aa4.32□□□□□ -1.72
CASP4-211ENST00000533252 ESPL1Q14674 2120 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 NOTCH2Q04721 2471 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 IQANK1A0A1B0GTG1 560 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 A0A1W2PPI3 338 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 A8MUA0 341 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 LCMT2O60294 686 aaKnown RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 CDC40O60508 579 aaKnown RBP eCLIP4.31□□□□□ -1.72
CASP4-211ENST00000533252 SLC19A2O60779 497 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 ZG16O60844 167 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 CTNSO60931 367 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 CDC123O75794 336 aaPredicted RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 PDE9AO76083 593 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 F10P00742 488 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 IGHV2-70P01814 119 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 HOXD4P09016 255 aaPredicted RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 CCDC166P0CW27 439 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 ZNF23P17027 643 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 ZNF24P17028 368 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 HTR1EP28566 365 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 PTGER4P35408 488 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 DEKP35659 375 aaKnown RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 PEX19P40855 299 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 HLCSP50747 726 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 CAPZA1P52907 286 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 PLA2G16P53816 162 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 MTTPP55157 894 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 RAB8AP61006 207 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 CKAP4Q07065 602 aaKnown RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 NAB1Q13506 487 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 PDK4Q16654 411 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 PRR30Q53SZ7 412 aaPredicted RBP4.31□□□□□ -1.72
CASP4-211ENST00000533252 FAM76BQ5HYJ3 339 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 TOR1AIP1Q5JTV8 583 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 CES4AQ5XG92 561 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 SPINK14Q6IE38 97 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 H3F3CQ6NXT2 135 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 TTC27Q6P3X3 843 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 ARHGAP11AQ6P4F7 1023 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 OPN5Q6U736 354 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 HSDL2Q6YN16 418 aa4.31□□□□□ -1.72
CASP4-211ENST00000533252 CYS1Q717R9 158 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms