RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 GOSR1O95249 250 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 PSMB1P20618 241 aaKnown RBP18.14■□□□□ 0.49
CCS-208ENST00000533244 EDNRAP25101 427 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 KDELR2P33947 212 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 LIPEQ05469 1076 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 SLC17A1Q14916 467 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 OTUD3Q5T2D3 398 aaPredicted RBP18.14■□□□□ 0.49
CCS-208ENST00000533244 TMEM99Q8N816 258 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 ZNF775Q96BV0 537 aaPredicted RBP18.14■□□□□ 0.49
CCS-208ENST00000533244 KTI12Q96EK9 354 aaPredicted RBP18.14■□□□□ 0.49
CCS-208ENST00000533244 TAPBPLQ9BX59 468 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 OR10A4Q9H209 315 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 FANCFQ9NPI8 374 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 NDRG3Q9UGV2 375 aa18.14■□□□□ 0.49
CCS-208ENST00000533244 HRNRQ86YZ3 2850 aaPredicted RBP18.13■□□□□ 0.49
CCS-208ENST00000533244 DCTN3O75935 186 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 AKR7A3O95154 331 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 LYPD3O95274 346 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 AHSA1O95433 338 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 FAM107AO95990 144 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 IFNA14P01570 189 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 NTF4P34130 210 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 CDH12P55289 794 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 TSPYL5Q86VY4 417 aaPredicted RBP18.13■□□□□ 0.49
CCS-208ENST00000533244 WFIKKN1Q96NZ8 548 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 LRRC37BQ96QE4 947 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 SF3B5Q9BWJ5 86 aaKnown RBP18.13■□□□□ 0.49
CCS-208ENST00000533244 RASSF1Q9NS23 344 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 BAG5Q9UL15 447 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 FLVCR1Q9Y5Y0 555 aa18.13■□□□□ 0.49
CCS-208ENST00000533244 NDUFAB1O14561 156 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 CNOT4O95628 575 aaKnown RBP18.12■□□□□ 0.49
CCS-208ENST00000533244 THY1P04216 161 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 GSK3BP49841 420 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 PSME3P61289 254 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 ENTPD8Q5MY95 495 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 LINC00114Q6XXX2 140 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 Q6ZT83 130 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 C22orf34Q6ZV56 151 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 VANGL1Q8TAA9 524 aaPredicted RBP18.12■□□□□ 0.49
CCS-208ENST00000533244 KLHL4Q9C0H6 718 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 ALG2Q9H553 416 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 ADPRHL2Q9NX46 363 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 PRSS50Q9UI38 385 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 SLC9A8Q9Y2E8 581 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 GPR52Q9Y2T5 361 aa18.12■□□□□ 0.49
CCS-208ENST00000533244 NOSIPQ9Y314 301 aaKnown RBP18.12■□□□□ 0.49
CCS-208ENST00000533244 TRAV36DV7A0A075B6V5 113 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 CHP2O43745 196 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 OR2T1O43869 369 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 RPS5P46782 204 aaKnown RBP18.11■□□□□ 0.49
CCS-208ENST00000533244 LRRC23Q53EV4 343 aaPredicted RBP18.11■□□□□ 0.49
CCS-208ENST00000533244 CYBRD1Q53TN4 286 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 FAM69AQ5T7M9 428 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 CARM1Q86X55 608 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 OR6S1Q8NH40 331 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 ADAMTS16Q8TE57 1224 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 PROX1Q92786 737 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 TAAR8Q969N4 342 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 TMEM43Q9BTV4 400 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 ARL8BQ9NVJ2 186 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 SELENONQ9NZV5 590 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 ABCA4P78363 2273 aa18.11■□□□□ 0.49
CCS-208ENST00000533244 CPSF4LA6NMK7 179 aaKnown RBP18.1■□□□□ 0.49
CCS-208ENST00000533244 VAMP5O95183 116 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 PPP3CBP16298 524 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 P2RY6Q15077 328 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 TMEM200AQ86VY9 491 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 CXorf67Q86X51 503 aaPredicted RBP18.1■□□□□ 0.49
CCS-208ENST00000533244 ZIC4Q8N9L1 334 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 OR9K2Q8NGE7 335 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 TMEM45BQ96B21 275 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 ZNF426Q9BUY5 554 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 SPAG4Q9NPE6 437 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 TAGLN3Q9UI15 199 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 SH3GLB1Q9Y371 365 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 SPG11Q96JI7 2443 aa18.1■□□□□ 0.49
CCS-208ENST00000533244 TRAPPC13A5PLN9 417 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 CXCR6O00574 342 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 TNFRSF1BP20333 461 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 COX5AP20674 150 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 CRYGSP22914 178 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 SELENOWP63302 87 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 POU4F3Q15319 338 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 SFRP5Q5T4F7 317 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 GKAP1Q5VSY0 366 aaPredicted RBP18.09■□□□□ 0.49
CCS-208ENST00000533244 WDR88Q6ZMY6 472 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.09■□□□□ 0.49
CCS-208ENST00000533244 P3H2Q8IVL5 708 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 APH1AQ96BI3 265 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 MED18Q9BUE0 208 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 HDHD5Q9BXW7 423 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 POLR2J2Q9GZM3 115 aaKnown RBP18.09■□□□□ 0.49
CCS-208ENST00000533244 POLR2J3Q9H1A7 115 aaKnown RBP18.09■□□□□ 0.49
CCS-208ENST00000533244 RASD1Q9Y272 281 aa18.09■□□□□ 0.49
CCS-208ENST00000533244 MRPL33O75394 65 aaKnown RBP18.08■□□□□ 0.49
CCS-208ENST00000533244 ADAP00813 363 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 HRGP04196 525 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 THBDP07204 575 aa18.08■□□□□ 0.49
CCS-208ENST00000533244 ITGADQ13349 1161 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms