RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZNF367Q7RTV3 350 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 OR8D4Q8NGM9 314 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 NT5CQ8TCD5 201 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 HTRA1Q92743 480 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ARSGQ96EG1 525 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF681Q96N22 645 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 QRFPRQ96P65 431 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 BBS4Q96RK4 519 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF607Q96SK3 696 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 KCNS3Q9BQ31 491 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SLC38A1Q9H2H9 487 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 MMP27Q9H306 513 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 Q9UFV3 132 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 MGAT4BQ9UQ53 548 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CARD8Q9Y2G2 431 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 GPR52Q9Y2T5 361 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 WBP11Q9Y2W2 641 aaKnown RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 FAM215AQ9Y5M1 114 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ZFHX3Q15911 3703 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 A0A087WUU8 490 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 A0A1B0GVC2 190 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 FAM47E-STBD1D6RA91 191 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 TLX2O43763 284 aaPredicted RBP7.46□□□□□ -1.21
NEDD8-207ENST00000533242 ITGA10O75578 1167 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 KCNK2O95069 426 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 LGI1O95970 557 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 IGHG3P01860 377 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 THY1P04216 161 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 CD79BP40259 229 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 SSR4P51571 173 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 GAS1P54826 345 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 OLR1P78380 273 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 EFNB1P98172 346 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 SYT14P1Q58G82 188 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 SLC48A1Q6P1K1 146 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 FAM111BQ6SJ93 734 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 PAMR1Q6UXH9 720 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 MDGA2Q7Z553 956 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 CDC20BQ86Y33 519 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 APCDD1LQ8NCL9 501 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 OR2L5Q8NG80 312 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 OR2M7Q8NG81 312 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 FAM222BQ8WU58 562 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 TSSK6Q9BXA6 273 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 PITHD1Q9GZP4 211 aaPredicted RBP7.46□□□□□ -1.21
NEDD8-207ENST00000533242 DEPPQ9NTK1 212 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 EHD3Q9NZN3 535 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 CNIH4Q9P003 139 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 PPIEQ9UNP9 301 aaKnown RBP7.46□□□□□ -1.21
NEDD8-207ENST00000533242 YARS2Q9Y2Z4 477 aaKnown RBP7.46□□□□□ -1.21
NEDD8-207ENST00000533242 MMACHCQ9Y4U1 282 aa7.46□□□□□ -1.21
NEDD8-207ENST00000533242 ANKHD1Q8IWZ3 2542 aaKnown RBP7.46□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF407Q9C0G0 2248 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 SPG11Q96JI7 2443 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 PNMA8CA0A1B0GUJ8 204 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 PINLYPA6NC86 204 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 A6NNC1 897 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 FAM166BA8MTA8 275 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 A8MUA0 341 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 CCRL2O00421 344 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 WDR1O75083 606 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 GLSO94925 669 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-207ENST00000533242 OXSR1O95747 527 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-207ENST00000533242 PIPP12273 146 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-207ENST00000533242 RNH1P13489 461 aaKnown RBP7.46□□□□□ -1.22
NEDD8-207ENST00000533242 SERPINB1P30740 379 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 RPS19P39019 145 aaKnown RBP7.46□□□□□ -1.22
NEDD8-207ENST00000533242 CRYBB2P43320 205 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 ETV1P50549 477 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 RNF144AP50876 292 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-207ENST00000533242 RGS1Q08116 209 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 DEFB134Q4QY38 66 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 GPAT3Q53EU6 434 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 C1orf185Q5T7R7 199 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 RIPPLY2Q5TAB7 128 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 RTL6Q6ICC9 239 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 ZNF585AQ6P3V2 769 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 TRILQ7L0X0 811 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 ABHD13Q7L211 337 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 SHFQ7M4L6 423 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 LIX1LQ8IVB5 337 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 OR4N5Q8IXE1 308 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 OR5M9Q8NGP3 310 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 GIMAP5Q96F15 307 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 OR7D2Q96RA2 312 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 KCMF1Q9P0J7 381 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 B4GALT7Q9UBV7 327 aa7.46□□□□□ -1.22
NEDD8-207ENST00000533242 SMIM30A4D0T7 59 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CPSF4LA6NMK7 179 aaKnown RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 AQP7O14520 342 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 SLITRK5O94991 958 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 RAF1P04049 648 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 SCG5P05408 212 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ZNF888P0CJ79 500 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 MAOAP21397 527 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 NTSP30990 170 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 GIPRP48546 466 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 NR0B1P51843 470 aaKnown RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TRA2BP62995 288 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms