RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 SELENONQ9NZV5 590 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 SLC9A8Q9Y2E8 581 aa17.64■□□□□ 0.41
CPSF1-209ENST00000532725 CPSF4LA6NMK7 179 aaKnown RBP17.63■□□□□ 0.41
CPSF1-209ENST00000532725 GSTA4O15217 222 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 FZD7O75084 574 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 AHSA1O95433 338 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 POU2F1P14859 743 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 TNFRSF1BP20333 461 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 SSTR2P30874 369 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 UGT2B10P36537 528 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 RPS5P46782 204 aaKnown RBP17.63■□□□□ 0.41
CPSF1-209ENST00000532725 SLC25A3Q00325 362 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 SLC17A1Q14916 467 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 EXOC3L2Q2M3D2 409 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 OTUD3Q5T2D3 398 aaPredicted RBP17.63■□□□□ 0.41
CPSF1-209ENST00000532725 C5orf46Q6UWT4 87 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 TFAP2EQ6VUC0 442 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 BEND4Q6ZU67 534 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 GDF7Q7Z4P5 450 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 GALNT5Q7Z7M9 940 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 ADAMTS16Q8TE57 1224 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 FAM222BQ8WU58 562 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 TAAR8Q969N4 342 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 NSL1Q96IY1 281 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 KCTD14Q9BQ13 255 aaPredicted RBP17.63■□□□□ 0.41
CPSF1-209ENST00000532725 ADPRHL2Q9NX46 363 aa17.63■□□□□ 0.41
CPSF1-209ENST00000532725 AQP7P3A6NL99 342 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 C16orf97H3BN30 126 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 OR2T1O43869 369 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 EPXP11678 715 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 EDNRAP25101 427 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 OR1E2P47887 323 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 OR3A2P47893 321 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 DAZAP2Q15038 168 aaPredicted RBP17.62■□□□□ 0.41
CPSF1-209ENST00000532725 STK32CQ86UX6 486 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 P3H2Q8IVL5 708 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 PGAM4Q8N0Y7 254 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 RNF217Q8TC41 542 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 SLC25A36Q96CQ1 311 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 TMEM43Q9BTV4 400 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 ADA2Q9NZK5 511 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 EMC3Q9P0I2 261 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 CD300AQ9UGN4 299 aa17.62■□□□□ 0.41
CPSF1-209ENST00000532725 TRAV36DV7A0A075B6V5 113 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 TRAPPC13A5PLN9 417 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 GPR171O14626 319 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 CHP2O43745 196 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 GGT1P19440 569 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 MNAT1P51948 309 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 TLE4Q04727 773 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 LTBQ06643 244 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 FAM69AQ5T7M9 428 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 STAC2Q6ZMT1 411 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 WDR88Q6ZMY6 472 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 CBLL1Q75N03 491 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 GABRG1Q8N1C3 465 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 ZIC4Q8N9L1 334 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 OR6S1Q8NH40 331 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 TPD52L3Q96J77 140 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 DACH2Q96NX9 599 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 WFIKKN1Q96NZ8 548 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 CDRT15Q96T59 188 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 SF3B5Q9BWJ5 86 aaKnown RBP17.61■□□□□ 0.41
CPSF1-209ENST00000532725 MCCC2Q9HCC0 563 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 FLVCR1Q9Y5Y0 555 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 MAST4O15021 2626 aa17.61■□□□□ 0.41
CPSF1-209ENST00000532725 TACC2O95359 2948 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 FAM221AA4D161 298 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 T-ENOLP0DO92 83 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 NCK1P16333 377 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 CCKARP32238 428 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 FXNQ16595 210 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 TMEM225Q6GV28 225 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 GLYATQ6IB77 296 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 C22orf34Q6ZV56 151 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 RNF148Q8N7C7 305 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 BCAS4Q8TDM0 211 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 LZICQ8WZA0 190 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 PRSS27Q9BQR3 290 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 KLHL4Q9C0H6 718 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 NDRG3Q9UGV2 375 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 PRSS50Q9UI38 385 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 SLC7A7Q9UM01 511 aa17.6■□□□□ 0.41
CPSF1-209ENST00000532725 NOSIPQ9Y314 301 aaKnown RBP17.6■□□□□ 0.41
CPSF1-209ENST00000532725 SH3D21A4FU49 640 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 B2RBV5 119 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 VAMP5O95183 116 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 BGLAPP02818 100 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 HSD17B1P14061 328 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 KRTAP10-9P60411 292 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 PIN1Q13526 163 aaPredicted RBP17.59■□□□□ 0.41
CPSF1-209ENST00000532725 VTCN1Q7Z7D3 282 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 ZNF100Q8IYN0 542 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 DEFB107AQ8IZN7 70 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 FAM156AQ8NDB6 213 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 OR9K2Q8NGE7 335 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 SLC41A3Q96GZ6 507 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 MPP4Q96JB8 637 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 EPYCQ99645 322 aa17.59■□□□□ 0.41
CPSF1-209ENST00000532725 ZNF426Q9BUY5 554 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms