RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 PIP5K1CO60331 668 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 WBP4O75554 376 aaKnown RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 SEC14L2O76054 403 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 ARHGDIBP52566 201 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 ROR2Q01974 943 aaKnown RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 PRKCDQ05655 676 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 FAPQ12884 760 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 SPHARQ15513 63 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 PGGHGQ32M88 737 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 WIPI1Q5MNZ9 446 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 SAXO2Q658L1 398 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 B3GNTL1Q67FW5 361 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 RHBDD2Q6NTF9 364 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 C16orf47Q6ZP98 133 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 MOB3CQ70IA8 216 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 H1FNTQ75WM6 255 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 ASRGL1Q7L266 308 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.32□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF583Q96ND8 569 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 MED20Q9H944 212 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 EDARQ9UNE0 448 aa7.32□□□□□ -1.24
CTNND1-230ENST00000532245 TRGV5A0A0B4J1U4 118 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 TMEM269A0A1B0GVZ9 245 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 TRABD2BA6NFA1 517 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 FAM90A27PA6NNH2 459 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CCRL2O00421 344 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 GAPDHSO14556 408 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF432O94892 652 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 MT-ND2P03891 347 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 DBHP09172 617 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF806P0C7X5 589 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 SPINK2P20155 84 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 HNRNPA0Q13151 305 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 SLC14A1Q13336 389 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 FAM219BQ5XKK7 198 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ADGRG5Q8IZF4 528 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 RNF113BQ8IZP6 322 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 OR1J2Q8NGS2 313 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 HDAC2Q92769 488 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 FAM173AQ9BQD7 235 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 TNFRSF12AQ9NP84 129 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 OLAHQ9NV23 265 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 KCNIP1Q9NZI2 227 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 M0R082 166 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CBR3O75828 277 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 PUDPQ08623 228 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CHRFAM7AQ494W8 412 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 C22orf42Q6IC83 251 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 SLC22A25Q6T423 547 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 LINC00346Q8IVM7 164 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 BEST3Q8N1M1 668 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 SLC25A45Q8N413 288 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 OR4N2Q8NGD1 307 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ROBO4Q8WZ75 1007 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 NMNAT3Q96T66 252 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 GPR87Q9BY21 358 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 PRDM7Q9NQW5 492 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 FOCADQ5VW36 1801 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 LNP1A1A4G5 178 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 FAM172BPA6NC97 362 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF593O00488 134 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 DNAJB5O75953 348 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ITGB2P05107 769 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 IFNGR1P15260 489 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 SLC1A3P43003 542 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ID4P47928 161 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 PNLIPRP2P54317 469 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 MZT1Q08AG7 82 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 THOC7Q6I9Y2 204 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 C19orf48Q6RUI8 117 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF322Q6U7Q0 402 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF704Q6ZNC4 412 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 BEND4Q6ZU67 534 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 MBOAT2Q6ZWT7 520 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF367Q7RTV3 350 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 RBM45Q8IUH3 476 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 PFN4Q8NHR9 129 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 LMF1Q96S06 567 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF768Q9H5H4 540 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 OR14J1Q9UGF5 321 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 NTNG1Q9Y2I2 539 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CABIN1Q9Y6J0 2220 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 TEX13DA0A0J9YY54 714 aaPredicted RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 PRAMEF27A3QJZ7 478 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CLDN24A6NM45 220 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 DOK2O60496 412 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 GASTP01350 101 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ACP2P11117 423 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ELAVL4P26378 380 aaKnown RBP7.31□□□□□ -1.24
CTNND1-230ENST00000532245 C4orf46Q504U0 113 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 SPINK14Q6IE38 97 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF613Q6PF04 617 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 ZNF793Q6ZN11 406 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CARFQ8N187 725 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 AMER3Q8N944 861 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 OR10G3Q8NGC4 313 aa7.31□□□□□ -1.24
CTNND1-230ENST00000532245 CA5BP1Q8WTZ4 195 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms