RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RNF130Q86XS8 419 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 MISPQ8IVT2 679 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 PM20D2Q8IYS1 436 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF808Q8N4W9 903 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 FADS6Q8N9I5 356 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 DTX3Q8N9I9 347 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 GATSQ8NAP1 163 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR2M3Q8NG83 312 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR9I1Q8NGQ6 314 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 MIPOL1Q8TD10 442 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 RND1Q92730 232 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ABTB1Q969K4 478 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 NEURL3Q96EH8 262 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 ITCHQ96J02 903 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 SFXN2Q96NB2 322 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 TIMP4Q99727 224 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 MRI1Q9BV20 369 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR2B2Q9GZK3 357 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR51I1Q9H343 314 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 DSN1Q9H410 356 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 FANCFQ9NPI8 374 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 POLE3Q9NRF9 147 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 PAPOLBQ9NRJ5 636 aaKnown RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 MED11Q9P086 117 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 PLEKHB1Q9UF11 243 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 AURKCQ9UQB9 309 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 RPH3AQ9Y2J0 694 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 UBE2J1Q9Y385 318 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 MRPS18CQ9Y3D5 142 aaKnown RBP5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 KCNE3Q9Y6H6 103 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 MYO18BQ8IUG5 2567 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 NBASA2RRP1 2371 aa5.22□□□□□ -1.57
HMGB1P42-201ENST00000532126 IGLV3-32A0A0A0MS00 114 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 NPIPA5A0A0B4J1W7 369 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 A0A0G2JND7 137 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 A0A1W2PQD3 144 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 FAM25EA8MYX2 175 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 AHRRA9YTQ3 701 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 B4DXG7 233 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 NPIPA7E9PJI5 369 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 NR5A2O00482 541 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 HCRTR2O43614 444 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZIC3O60481 467 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 FCMRO60667 390 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 STX11O75558 287 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 KRT75O95678 551 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 CLDN1O95832 211 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 VIMP08670 466 aaKnown RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 HOXD4P09016 255 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 DBHP09172 617 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZCCHC18P0CG32 403 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 NPIPA8P0DM63 369 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 OR12D1P0DN82 309 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 TROVE2P10155 538 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 GP1BBP13224 206 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 HK1P19367 917 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 NCF2P19878 526 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 AGAP20933 346 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 DCTP40126 519 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 MRPL19P49406 292 aaKnown RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 STARP49675 285 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ATP4BP51164 291 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF81P51508 661 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 LUMP51884 338 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ATP12AP54707 1039 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 TXNL4AP83876 142 aaKnown RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 HPCAP84074 193 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 SRYQ05066 204 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 PMPCAQ10713 525 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 NPRL3Q12980 569 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 RCAN2Q14206 197 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 SQLEQ14534 574 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 GANABQ14697 944 aaKnown RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF630Q2M218 657 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ARHGAP11BQ3KRB8 267 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 KLHL26Q53HC5 615 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 C1orf185Q5T7R7 199 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 RAET1LQ5VY80 246 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 METTL21CQ5VZV1 264 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF529Q6P280 563 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ENPP6Q6UWR7 440 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 B3GNT6Q6ZMB0 384 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 PLEKHM3Q6ZWE6 761 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 MTERF4Q7Z6M4 381 aaKnown RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 RPRMLQ8N4K4 120 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 MARVELD2Q8N4S9 558 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ZNF614Q8N883 585 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 CHDHQ8NE62 594 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 OR10Q1Q8NGQ4 319 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 B4GALNT2Q8NHY0 566 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 PNPT1Q8TCS8 783 aaKnown RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 CA5BP1Q8WTZ4 195 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 FAM216AQ8WUB2 273 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 XAGE5Q8WWM1 108 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ITLN2Q8WWU7 325 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 RAB8BQ92930 207 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 ROPN1LQ96C74 230 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 SPDL1Q96EA4 605 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 WDYHV1Q96HA8 205 aa5.21□□□□□ -1.58
HMGB1P42-201ENST00000532126 SH3YL1Q96HL8 342 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms