RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SLC25A3Q00325 362 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 LARS2Q15031 903 aaKnown RBP14.75□□□□□ -0.05
CPSF1-207ENST00000531727 GTDC1Q4AE62 458 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 RPS26P11Q5JNZ5 115 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-207ENST00000531727 MAVSQ7Z434 540 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 FBXL14Q8N1E6 418 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 MUC15Q8N387 334 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 CADM2Q8N3J6 435 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 ZIC4Q8N9L1 334 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 POMGNT2Q8NAT1 580 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 AURKBQ96GD4 344 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-207ENST00000531727 TMEM19Q96HH6 336 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 PIF1Q9H611 641 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 THUMPD1Q9NXG2 353 aaKnown RBP14.75□□□□□ -0.05
CPSF1-207ENST00000531727 NKIRAS1Q9NYS0 192 aa14.75□□□□□ -0.05
CPSF1-207ENST00000531727 CHD3Q12873 2000 aaKnown RBP14.75□□□□□ -0.05
CPSF1-207ENST00000531727 CSPG4Q6UVK1 2322 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 A0A0G2JPF8 293 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 A8MVM7 634 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 HNRNPCL2B2RXH8 293 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 HNRNPCL3B7ZW38 293 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 UBDO15205 165 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 CD5LO43866 347 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 HNRNPCL1O60812 293 aaKnown RBP14.74□□□□□ -0.05
CPSF1-207ENST00000531727 HNRNPCL4P0DMR1 293 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 POLR2JP52435 117 aaKnown RBP14.74□□□□□ -0.05
CPSF1-207ENST00000531727 MAGOHP61326 146 aaKnown RBP14.74□□□□□ -0.05
CPSF1-207ENST00000531727 BNIP2Q12982 314 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 ZNF544Q6NX49 715 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 AAED1Q7RTV5 226 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 CLIP4Q8N3C7 705 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 OR9I1Q8NGQ6 314 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 BOD1Q96IK1 185 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 ZNF385AQ96PM9 386 aaKnown RBP14.74□□□□□ -0.05
CPSF1-207ENST00000531727 OR52B2Q96RD2 323 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 SPATA9Q9BWV2 254 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 TAPBPLQ9BX59 468 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 FKRPQ9H9S5 495 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 CACYBPQ9HB71 228 aaKnown RBP14.74□□□□□ -0.05
CPSF1-207ENST00000531727 ZNF232Q9UNY5 417 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 CHST2Q9Y4C5 530 aa14.74□□□□□ -0.05
CPSF1-207ENST00000531727 ANK3Q12955 4377 aaKnown RBP14.73□□□□□ -0.05
CPSF1-207ENST00000531727 IGHV4-30-2A0A087WSY4 118 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 TMEM247A6NEH6 219 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 FRS3O43559 492 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 TLX2O43763 284 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-207ENST00000531727 WNT11O96014 354 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 PRG2P13727 222 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 NCF2P19878 526 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-207ENST00000531727 P2RY4P51582 365 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 PRPS1P60891 318 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 C6orf10Q5SRN2 563 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 C1orf140Q5VVS0 124 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 TMEM225Q6GV28 225 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 ABHD12BQ7Z5M8 362 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-207ENST00000531727 GPAT4Q86UL3 456 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 MIER2Q8N344 545 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 OR10H5Q8NGA6 315 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 VPS33AQ96AX1 596 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 TLCD1Q96CP7 247 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 ARMC7Q9H6L4 198 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 ADPRHL2Q9NX46 363 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 IFT52Q9Y366 437 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 ATP23Q9Y6H3 246 aa14.73□□□□□ -0.05
CPSF1-207ENST00000531727 A0A096LPI6 279 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 FAM234BA2RU67 622 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 TMEM229AB2RXF0 380 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 H7C417 338 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 KLF11O14901 512 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 NPIPB7O75200 414 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 VAMP5O95183 116 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 DSCR9P59020 149 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 RAB35Q15286 201 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 PRAMEF8Q5VWM4 474 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 PRAMEF7Q5VXH5 474 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 KLHL24Q6TFL4 600 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 CLEC2AQ6UVW9 174 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 SERPINA11Q86U17 422 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 GTF2H4Q92759 462 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 C3orf49Q96BT1 292 aa14.72□□□□□ -0.05
CPSF1-207ENST00000531727 PAIP1Q9H074 479 aaKnown RBP14.72□□□□□ -0.05
CPSF1-207ENST00000531727 A0A096LNT2 108 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 CDH2P19022 906 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-207ENST00000531727 APOBEC3AP31941 199 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-207ENST00000531727 RGNQ15493 299 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 HIKESHIQ53FT3 197 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 ZNF311Q5JNZ3 666 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 CREB3L2Q70SY1 520 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 STK35Q8TDR2 534 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 HTRA1Q92743 480 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 SLC35B4Q969S0 331 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 RAD21L1Q9H4I0 556 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 TMBIM4Q9HC24 238 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 BCL2L10Q9HD36 194 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 A4GALTQ9NPC4 353 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 OBP2BQ9NPH6 170 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 YAE1D1Q9NRH1 226 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 RASD1Q9Y272 281 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 PCDHB14Q9Y5E9 798 aa14.71□□□□□ -0.05
CPSF1-207ENST00000531727 USH1CQ9Y6N9 552 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms