RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 BTNL2Q9UIR0 455 aa16.07■□□□□ 0.16
SSSCA1-206ENST00000531405 FAAHO00519 579 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 LGI1O95970 557 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 GPIP06744 558 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 ALDOCP09972 364 aaKnown RBP16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 IL12AP29459 219 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 NR4A2P43354 598 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 SLC1A6P48664 564 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 GZMKP49863 264 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 MSI2Q96DH6 328 aaKnown RBP16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 PANX1Q96RD7 426 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 PIMREGQ9BSJ6 248 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 ADAM19Q9H013 955 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 MTHFD2LQ9H903 347 aaPredicted RBP16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 ADPRHL2Q9NX46 363 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 FKBP7Q9Y680 259 aa16.06■□□□□ 0.16
SSSCA1-206ENST00000531405 IGHV4-61A0A0C4DH41 118 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 LOC100289279A0A1B0GTE1 492 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 AQP7P3A6NL99 342 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 KRT33AO76009 404 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 DBIP07108 87 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 NR2F1P10589 423 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 SRD5A1P18405 259 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 CXCR1P25024 350 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 SNRPD2P62316 118 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 TUBA1BP68363 451 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 TUBA4AP68366 448 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 MAPK11Q15759 364 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 TBRG1Q3YBR2 411 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 FAM120AOSQ5T036 256 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 FAM166AQ6J272 317 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 ZNF621Q6ZSS3 439 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 TUBA1AQ71U36 451 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 LINGO2Q7L985 606 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 SPATA19Q7Z5L4 167 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 VRK2Q86Y07 508 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 CADM2Q8N3J6 435 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 POMGNT2Q8NAT1 580 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 OR1K1Q8NGR3 316 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 AENQ8WTP8 325 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 FOXN4Q96NZ1 517 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 ALKBH3Q96Q83 286 aaPredicted RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 SLC38A2Q96QD8 506 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 VRK1Q99986 396 aaPredicted RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 C19orf24Q9BVV8 132 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 SF3B5Q9BWJ5 86 aaKnown RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 PNPOQ9NVS9 261 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 KCNS2Q9ULS6 477 aa16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.05■□□□□ 0.16
SSSCA1-206ENST00000531405 NR5A2O00482 541 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 APEHP13798 732 aaKnown RBP16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 UQCRBP14927 111 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 BGNP21810 368 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 SELENOPP49908 381 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 P2RY4P51582 365 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 MAP2K6P52564 334 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 GNA13Q14344 377 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 VHLLQ6RSH7 139 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 ZNF836Q6ZNA1 936 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 SLC46A3Q7Z3Q1 461 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 TRIML2Q8N7C3 387 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 OR52E6Q96RD3 313 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 KCNS3Q9BQ31 491 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 SEC61A2Q9H9S3 476 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 MEAF6Q9HAF1 191 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 CA10Q9NS85 328 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 TMEM45AQ9NWC5 275 aa16.04■□□□□ 0.16
SSSCA1-206ENST00000531405 CDHR4A6H8M9 788 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 NDUFS8O00217 210 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 BIRC5O15392 142 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 PGRP06401 933 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 SERPINF1P36955 418 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 ACAA2P42765 397 aaKnown RBP16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 ANXA11P50995 505 aaKnown RBP16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 TMEM225Q6GV28 225 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 CREB3L2Q70SY1 520 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 ABHD12BQ7Z5M8 362 aaPredicted RBP16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 PEX5LQ8IYB4 626 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 BOD1Q96IK1 185 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 TAPBPLQ9BX59 468 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 SLC6A13Q9NSD5 602 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 AIG1Q9NVV5 245 aa16.03■□□□□ 0.16
SSSCA1-206ENST00000531405 A0A096LPE4 126 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 A0A1W2PPZ6 126 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 ZNF587BE7ETH6 402 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 FRS3O43559 492 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 UPK3AO75631 287 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 CRYAAP02489 173 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 OR4A8P0C604 315 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 PRG2P13727 222 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 CALCRP30988 508 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 UBE2NP61088 152 aaKnown RBP16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 ADIPOQQ15848 244 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 GSTA3Q16772 222 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 KRT71Q3SY84 523 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 IQCCQ4KMZ1 466 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 C1QTNF12Q5T7M4 302 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 OGFOD2Q6N063 350 aa16.02■□□□□ 0.16
SSSCA1-206ENST00000531405 NIPAL3Q6P499 406 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms