RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 MANSC1Q9H8J5 431 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 SDR39U1Q9NRG7 319 aaPredicted RBP13.84□□□□□ -0.19
CPSF1-205ENST00000531042 ZNF443Q9Y2A4 671 aaPredicted RBP13.84□□□□□ -0.19
CPSF1-205ENST00000531042 AMDHD2Q9Y303 409 aa13.84□□□□□ -0.19
CPSF1-205ENST00000531042 TP53P04637 393 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 MPGP29372 298 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 FABP6P51161 128 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 POLR2JP52435 117 aaKnown RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 MAGOHP61326 146 aaKnown RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 COPZ1P61923 177 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 SLC25A3Q00325 362 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 BNIP2Q12982 314 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 RPS26P11Q5JNZ5 115 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 C1QTNF12Q5T7M4 302 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 RNF220Q5VTB9 566 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 CLIP4Q8N3C7 705 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 AURKBQ96GD4 344 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 ZNF385AQ96PM9 386 aaKnown RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 OR52B2Q96RD2 323 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 RHNO1Q9BSD3 238 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 HEATR1Q9H583 2144 aaKnown RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 PIF1Q9H611 641 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 THUMPD1Q9NXG2 353 aaKnown RBP13.83□□□□□ -0.2
CPSF1-205ENST00000531042 ZNF232Q9UNY5 417 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 CHST2Q9Y4C5 530 aa13.83□□□□□ -0.2
CPSF1-205ENST00000531042 SONP18583 2426 aaKnown RBP13.82□□□□□ -0.2
CPSF1-205ENST00000531042 ABCA1O95477 2261 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 A0A0G2JPF8 293 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 A8MVM7 634 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 HNRNPCL3B7ZW38 293 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 UBDO15205 165 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 TLX2O43763 284 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-205ENST00000531042 CD5LO43866 347 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
CPSF1-205ENST00000531042 HNRNPCL4P0DMR1 293 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 PRG2P13727 222 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 P2RY4P51582 365 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 NUDT6P53370 316 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 LARS2Q15031 903 aaKnown RBP13.82□□□□□ -0.2
CPSF1-205ENST00000531042 TMEM225Q6GV28 225 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 ZNF544Q6NX49 715 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 GPAT4Q86UL3 456 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 POMGNT2Q8NAT1 580 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 OR10H5Q8NGA6 315 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 OR9I1Q8NGQ6 314 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 VPS33AQ96AX1 596 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 TMEM19Q96HH6 336 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 BOD1Q96IK1 185 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 SPATA9Q9BWV2 254 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 TAPBPLQ9BX59 468 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 ADPRHL2Q9NX46 363 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
CPSF1-205ENST00000531042 IGHV4-30-2A0A087WSY4 118 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 KLF11O14901 512 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 FRS3O43559 492 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 NPIPB7O75200 414 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 NCF2P19878 526 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-205ENST00000531042 DSCR9P59020 149 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 PRPS1P60891 318 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 RAB35Q15286 201 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 C6orf10Q5SRN2 563 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 C1orf140Q5VVS0 124 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 SERPINA11Q86U17 422 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 GTF2H4Q92759 462 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 C3orf49Q96BT1 292 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 TLCD1Q96CP7 247 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 PAIP1Q9H074 479 aaKnown RBP13.81□□□□□ -0.2
CPSF1-205ENST00000531042 ARMC7Q9H6L4 198 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 FKRPQ9H9S5 495 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 TMBIM4Q9HC24 238 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 IFT52Q9Y366 437 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 PCDHB14Q9Y5E9 798 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 ATP23Q9Y6H3 246 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 ALPK2Q86TB3 2170 aa13.81□□□□□ -0.2
CPSF1-205ENST00000531042 A0A096LNT2 108 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 A0A096LPI6 279 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 FAM234BA2RU67 622 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 TMEM229AB2RXF0 380 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 H7C417 338 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 VAMP5O95183 116 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 WNT11O96014 354 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 NUDT7P0C024 238 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 CDH2P19022 906 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-205ENST00000531042 APOBEC3AP31941 199 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-205ENST00000531042 RGNQ15493 299 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 HIKESHIQ53FT3 197 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 ZNF311Q5JNZ3 666 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 KLHL24Q6TFL4 600 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 CLEC2AQ6UVW9 174 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 CREB3L2Q70SY1 520 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 ABHD12BQ7Z5M8 362 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-205ENST00000531042 MIER2Q8N344 545 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 STK35Q8TDR2 534 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 HTRA1Q92743 480 aa13.8□□□□□ -0.2
CPSF1-205ENST00000531042 CACYBPQ9HB71 228 aaKnown RBP13.8□□□□□ -0.2
CPSF1-205ENST00000531042 BCL2L10Q9HD36 194 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms