RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CCDC154A6NI56 674 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 AQP7P3A6NL99 342 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 HAX1O00165 279 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 RGS16O15492 202 aaPredicted RBP13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 LGI1O95970 557 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 C1QCP02747 245 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 GSNP06396 782 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 DBIP07108 87 aaKnown RBP13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 BGNP21810 368 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 IGFBP5P24593 272 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 COPZ1P61923 177 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 TXNL4AP83876 142 aaKnown RBP13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 H3F3AP84243 136 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 ANKS4BQ8N8V4 417 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 ZNF385AQ96PM9 386 aaKnown RBP13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 SORCS2Q96PQ0 1159 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 SLC38A2Q96QD8 506 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 OR52E6Q96RD3 313 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 CENPHQ9H3R5 247 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 P2RX2Q9UBL9 471 aa13.82□□□□□ -0.2
CHMP4A-204ENST00000530996 LIPT2A6NK58 231 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 FAAHO00519 579 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 BIRC5O15392 142 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 F12P00748 615 aaPredicted RBP13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 CRYAAP02489 173 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 BCHEP06276 602 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 GKN3PP0CG01 181 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 GTF2E2P29084 291 aaKnown RBP13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 CDKN2CP42773 168 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 MAP2K6P52564 334 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 UFM1P61960 85 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 BNIP2Q12982 314 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 KRTAP24-1Q3LI83 254 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 TBRG1Q3YBR2 411 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 COX20Q5RI15 118 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 PRAMEF8Q5VWM4 474 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 PRAMEF7Q5VXH5 474 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 TMEM225Q6GV28 225 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 SORT1Q99523 831 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 PAIP2Q9BPZ3 127 aaKnown RBP13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 SF3B5Q9BWJ5 86 aaKnown RBP13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 OBP2BQ9NPH6 170 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 TMEM45AQ9NWC5 275 aa13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
CHMP4A-204ENST00000530996 CUBNO60494 3623 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 IGHV1-18A0A0C4DH31 117 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 NDUFS8O00217 210 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 RFXANKO14593 260 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 TM9SF1O15321 606 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 FRS3O43559 492 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 PGRP06401 933 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 RPS4Y1P22090 263 aaKnown RBP13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 SERPINF1P36955 418 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 CRATP43155 626 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 NR4A2P43354 598 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 TUBA1BP68363 451 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 TUBA4AP68366 448 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 LGALS3BPQ08380 585 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 NIPAL3Q6P499 406 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 ZNF836Q6ZNA1 936 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 TUBA1AQ71U36 451 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 VRK2Q86Y07 508 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 LRRC34Q8IZ02 419 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 OR1K1Q8NGR3 316 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 OR52P1PQ8NH57 321 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 TEX37Q96LM6 180 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 C20orf27Q9GZN8 174 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 MTHFD2LQ9H903 347 aaPredicted RBP13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 KCNK9Q9NPC2 374 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 CA10Q9NS85 328 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 AIG1Q9NVV5 245 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 RLIMQ9NVW2 624 aa13.8□□□□□ -0.2
CHMP4A-204ENST00000530996 A0A096LPE4 126 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 A0A1W2PPZ6 126 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 TMEM247A6NEH6 219 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 AHSA1O95433 338 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 ANP32DO95626 131 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 KRT75O95678 551 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 ERCC1P07992 297 aaPredicted RBP13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 ALDOCP09972 364 aaKnown RBP13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 SELENOPP49908 381 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 CRISP3P54108 245 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 SRSF2Q01130 221 aaKnown RBP13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 STX3Q13277 289 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 GSTA3Q16772 222 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 RPS26P11Q5JNZ5 115 aaPredicted RBP13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 C1QTNF12Q5T7M4 302 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 C1orf140Q5VVS0 124 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 ATG16L1Q676U5 607 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 NXNQ6DKJ4 435 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 ZBTB9Q96C00 473 aa13.79□□□□□ -0.2
CHMP4A-204ENST00000530996 KATNB1Q9BVA0 655 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms