RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TIMD4Q96H15 378 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 KCNA7Q96RP8 456 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 RASL11BQ9BPW5 248 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 SLC25A39Q9BZJ4 359 aaPredicted RBP2.88□□□□□ -1.95
CTR9-204ENST00000529355 RAB33BQ9H082 229 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 RNF167Q9H6Y7 350 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 CHMP5Q9NZZ3 219 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 ZNF225Q9UK10 706 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 RASD1Q9Y272 281 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 NOSIPQ9Y314 301 aaKnown RBP2.88□□□□□ -1.95
CTR9-204ENST00000529355 WSB1Q9Y6I7 421 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 V9GY05 133 aa2.88□□□□□ -1.95
CTR9-204ENST00000529355 IBTKQ9P2D0 1353 aaPredicted RBP2.87□□□□□ -1.95
CTR9-204ENST00000529355 PTPRGP23470 1445 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 TRDCB7Z8K6 153 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 E9PBE3 544 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 NPIPA7E9PJI5 369 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 BOLA2-SMG1P6H3BVE0 249 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 CASQ2O14958 399 aaPredicted RBP2.87□□□□□ -1.95
CTR9-204ENST00000529355 TAPBPO15533 448 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 HCRTR1O43613 425 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 HEXBP07686 556 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 CHTF8P0CG12 524 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 NPIPA8P0DM63 369 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 CD9P21926 228 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 S100A5P33763 92 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 HSD17B7P56937 341 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 SELENOTP62341 195 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 KLHL30Q0D2K2 578 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 ARL6IP1Q15041 203 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 C1orf100Q5SVJ3 147 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 MOB3BQ86TA1 216 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 DHRSXQ8N5I4 330 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 FAM71E2Q8N5Q1 922 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 OR4K14Q8NGD5 310 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 OR4D5Q8NGN0 318 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.87□□□□□ -1.95
CTR9-204ENST00000529355 CMTM7Q96FZ5 175 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 NAT9Q9BTE0 207 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 TPPP3Q9BW30 176 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 SMPD3Q9NY59 655 aaPredicted RBP2.87□□□□□ -1.95
CTR9-204ENST00000529355 TBK1Q9UHD2 729 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 ZNF223Q9UK11 482 aaPredicted RBP2.87□□□□□ -1.95
CTR9-204ENST00000529355 KLK12Q9UKR0 248 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 NPIPA1Q9UND3 350 aa2.87□□□□□ -1.95
CTR9-204ENST00000529355 VIRMAQ69YN4 1812 aaKnown RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 COL4A4P53420 1690 aaPredicted RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 MTCL1Q9Y4B5 1905 aaKnown RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 SYNJ2BP-COX16A0A087WUM0 186 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 M0QX08 132 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 POLR3GO15318 223 aaPredicted RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 PEX11AO75192 247 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 MFN2O95140 757 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 YEATS4O95619 227 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 MMP1P03956 469 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 P04436 131 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 PCCAP05165 728 aaPredicted RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 IQCF3P0C7M6 154 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 RPS2P15880 293 aaKnown RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 LAP3P28838 519 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 SHMT2P34897 504 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 ACAA2P42765 397 aaKnown RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 CBX1P83916 185 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 CSTF1Q05048 431 aaKnown RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 REG3AQ06141 175 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 MADCAM1Q13477 382 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 ARFRP1Q13795 201 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 RCN1Q15293 331 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 SLC15A2Q16348 729 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 SLC36A3Q495N2 470 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 HSP90AA5PQ58FG0 334 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 CASC10Q5T4H9 136 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 AGBL2Q5U5Z8 902 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 KHDRBS2Q5VWX1 349 aaKnown RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 CTRB2Q6GPI1 263 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 RDH10Q8IZV5 341 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 FANK1Q8TC84 345 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 MARCH1Q8TCQ1 289 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 DNAJA4Q8WW22 397 aaPredicted RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 ZNF75CPQ92670 426 aaPredicted RBP2.86□□□□□ -1.95
CTR9-204ENST00000529355 UCN3Q969E3 161 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 C8orf76Q96K31 380 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 NIPSNAP3BQ9BS92 247 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 ALG12Q9BV10 488 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 CAPS2Q9BXY5 557 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 PLA2G2FQ9BZM2 168 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 C20orf85Q9H1P6 137 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 SMYD3Q9H7B4 428 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 TMEM94Q12767 1356 aa2.86□□□□□ -1.95
CTR9-204ENST00000529355 SCAPERQ9BY12 1400 aa2.85□□□□□ -1.95
CTR9-204ENST00000529355 SCN2AQ99250 2005 aa2.85□□□□□ -1.95
CTR9-204ENST00000529355 IGHV1OR21-1A0A087WYE8 117 aa2.85□□□□□ -1.95
CTR9-204ENST00000529355 LINC00854A0A1B0GVQ3 168 aa2.85□□□□□ -1.95
CTR9-204ENST00000529355 METTL21EPA6NDL7 271 aa2.85□□□□□ -1.95
CTR9-204ENST00000529355 HELTA6NFD8 242 aa2.85□□□□□ -1.95
CTR9-204ENST00000529355 PFKFB2O60825 505 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms