RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-205	ENST00000527497	TMEM80	Q96HE8	168 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	CELF6	Q96J87	481 aa	Known RBP	4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	RBM4B	Q9BQ04	359 aa	Known RBP	4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	UCK2	Q9BZX2	261 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	HIPK2	Q9H2X6	1198 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	LIME1	Q9H400	295 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	RBKS	Q9H477	322 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	GOLPH3	Q9H4A6	298 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	SP140L	Q9H930	580 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	EXOSC3	Q9NQT5	275 aa	Known RBP	4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	ABCD2	Q9UBJ2	740 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF229	Q9UJW7	825 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	GGA2	Q9UJY4	613 aa		4.98	□□□□□ -1.61
NXF1-205	ENST00000527497	TRPC5OS	A6NMA1	111 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	RSPH10B2	B2RC85	870 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	GOSR2	O14653	212 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PCDH7	O60245	1069 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	SOX15	O60248	233 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	CRTAP	O75718	401 aa	Predicted RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	NXPH4	O95158	308 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ATP1A1	P05023	1023 aa	Known RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	RSPH10B	P0C881	870 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	UBTFL1	P0CB47	393 aa	Predicted RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	HSD17B1	P14061	328 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	NQO2	P16083	231 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	MARK3	P27448	753 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ATP4B	P51164	291 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PLTP	P55058	493 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PKNOX1	P55347	436 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	VLDLR	P98155	873 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	OXA1L	Q15070	435 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	CARD16	Q5EG05	197 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PPM1L	Q5SGD2	360 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	MEDAG	Q5VYS4	303 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF425	Q6IV72	752 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF549	Q6P9A3	640 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	SPESP1	Q6UW49	350 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PGAP1	Q75T13	922 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PID1	Q7Z2X4	250 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	CARM1	Q86X55	608 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF100	Q8IYN0	542 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	KRT222	Q8N1A0	295 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	SLC39A11	Q8N1S5	342 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	C17orf78	Q8N4C9	275 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	CSNK1A1L	Q8N752	337 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	TSSK3	Q96PN8	268 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF300	Q96RE9	604 aa	Predicted RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ECSIT	Q9BQ95	431 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	NDEL1	Q9GZM8	345 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	HDHD2	Q9H0R4	259 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	DDX31	Q9H8H2	851 aa	Known RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	NTN4	Q9HB63	628 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	UXT	Q9UBK9	157 aa	Predicted RBP	4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	PPP1R3C	Q9UQK1	317 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	SLC17A4	Q9Y2C5	497 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	FBXO7	Q9Y3I1	522 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	SMCHD1	A6NHR9	2005 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	USP6	P35125	1406 aa		4.97	□□□□□ -1.61
NXF1-205	ENST00000527497	EVPL	Q92817	2033 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	PLEKHH1	Q9ULM0	1364 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	MEX3A	A1L020	520 aa	Known RBP	4.96	□□□□□ -1.62
NXF1-205	ENST00000527497		E7EWF7	191 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	ZNF749	O43361	778 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	NR2C1	P13056	603 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	BCL3	P20749	454 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	IL32	P24001	234 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	IGFBP5	P24593	272 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	FAS	P25445	335 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	GABRR2	P28476	465 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	IL12B	P29460	328 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	S100A5	P33763	92 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	UGT1A3	P35503	534 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	TNFSF9	P41273	254 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	CRAT	P43155	626 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	SLC26A2	P50443	739 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	BLVRA	P53004	296 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	ATP5J2	P56134	94 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	RPS14	P62263	151 aa	Known RBP	4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	PAX2	Q02962	417 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	MS4A13	Q5J8X5	152 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	SOHLH1	Q5JUK2	328 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	FAM219B	Q5XKK7	198 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	ZNF836	Q6ZNA1	936 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	GPRIN3	Q6ZVF9	776 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	ARC	Q7LC44	396 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	ASCL5	Q7RTU5	278 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	C16orf82	Q7Z2V1	217 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	PRIMA1	Q86XR5	153 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	OR52B6	Q8NGF0	335 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	GTF3A	Q92664	365 aa	Known RBP	4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	MYDGF	Q969H8	173 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	SH3GL1	Q99961	368 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	GBA3	Q9H227	469 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	B3GAT2	Q9NPZ5	323 aa		4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	THUMPD1	Q9NXG2	353 aa	Known RBP	4.96	□□□□□ -1.62
NXF1-205	ENST00000527497	WWOX	Q9NZC7	414 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms