RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-218ENST00000527118 PLCE1Q9P212 2302 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 AQP7P3A6NL99 342 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 A8MVM7 634 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 C5orf58C9J3I9 102 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 PDLIM1O00151 329 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 BMP2P12643 396 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 PTNP21246 168 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 AQP5P55064 265 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 PAGE3Q5JUK9 113 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 C1orf140Q5VVS0 124 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 C10orf111Q8N326 155 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 ZIC4Q8N9L1 334 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 OR9K2Q8NGE7 335 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 NFKBIDQ8NI38 313 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
RBBP4-218ENST00000527118 MUS81Q96NY9 551 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 TAPBPLQ9BX59 468 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 BCL2L10Q9HD36 194 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 PARPBPQ9NWS1 579 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 VAPAQ9P0L0 249 aa13.72□□□□□ -0.21
RBBP4-218ENST00000527118 FN1P02751 2386 aaKnown RBP13.71□□□□□ -0.21
RBBP4-218ENST00000527118 M0R1B8 84 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 CD8AP01732 235 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 TNK1Q13470 666 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 VEZF1Q14119 521 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 ZSWIM7Q19AV6 140 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 CLEC12BQ2HXU8 276 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 AGKQ53H12 422 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 LRIF1Q5T3J3 769 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 GCNT6Q5T4J0 391 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 TMEM225Q6GV28 225 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 OR7E24Q6IFN5 339 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 KLHL17Q6TDP4 642 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 TMEM108Q6UXF1 575 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 SSX8Q7RTT4 187 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 AAED1Q7RTV5 226 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 WDR31Q8NA23 367 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 TMEM45BQ96B21 275 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 THOC1Q96FV9 657 aaKnown RBP13.71□□□□□ -0.21
RBBP4-218ENST00000527118 TRAF4Q9BUZ4 470 aaPredicted RBP13.71□□□□□ -0.21
RBBP4-218ENST00000527118 SF3B5Q9BWJ5 86 aaKnown RBP13.71□□□□□ -0.21
RBBP4-218ENST00000527118 RSPO3Q9BXY4 272 aaPredicted RBP13.71□□□□□ -0.21
RBBP4-218ENST00000527118 ALG2Q9H553 416 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 SLC52A3Q9NQ40 469 aa13.71□□□□□ -0.21
RBBP4-218ENST00000527118 TMEM229AB2RXF0 380 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 NDUFS7O75251 213 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 ARAFP10398 606 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
RBBP4-218ENST00000527118 CD40P25942 277 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 P2RY4P51582 365 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 SLC25A3Q00325 362 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 LGALS3BPQ08380 585 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 PRAMEF8Q5VWM4 474 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 PRAMEF7Q5VXH5 474 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 SLC22A25Q6T423 547 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 COMTD1Q86VU5 262 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 MAPK1IP1LQ8NDC0 245 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 AMBRA1Q9C0C7 1298 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 SLCO5A1Q9H2Y9 848 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 IKZF5Q9H5V7 419 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 DCTN4Q9UJW0 460 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 GDF2Q9UK05 429 aaPredicted RBP13.7□□□□□ -0.22
RBBP4-218ENST00000527118 POU2F3Q9UKI9 436 aa13.7□□□□□ -0.22
RBBP4-218ENST00000527118 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 E7EQL1 145 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 NPIPB7O75200 414 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 IGHV4-39P01824 125 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 ETS2P15036 469 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 PTAFRP25105 342 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 PCSK6P29122 969 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 MPGP29372 298 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 ACVR1BP36896 505 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 RPS5P46782 204 aaKnown RBP13.69□□□□□ -0.22
RBBP4-218ENST00000527118 CDK6Q00534 326 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 SQLEQ14534 574 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 B3GLCTQ6Y288 498 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 CREB3L2Q70SY1 520 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 SLC25A36Q96CQ1 311 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 SLC17A5Q9NRA2 495 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 INTS9Q9NV88 658 aaKnown RBP13.69□□□□□ -0.22
RBBP4-218ENST00000527118 FAIMQ9NVQ4 179 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 RPS6KB2Q9UBS0 482 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.69□□□□□ -0.22
RBBP4-218ENST00000527118 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 MGAT4BQ9UQ53 548 aa13.69□□□□□ -0.22
RBBP4-218ENST00000527118 CSPG4Q6UVK1 2322 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 ALPK2Q86TB3 2170 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 TRBV5-3A0A0A0MS03 114 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 ELOA3DA6NLF2 546 aaPredicted RBP13.68□□□□□ -0.22
RBBP4-218ENST00000527118 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 TPST1O60507 370 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 KRT33AO76009 404 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 AHSA1O95433 338 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
RBBP4-218ENST00000527118 HTR2AP28223 471 aa13.68□□□□□ -0.22
RBBP4-218ENST00000527118 PRKAR1BP31321 381 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms