RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZNF607Q96SK3 696 aa9.73□□□□□ -0.85
NEDD8-204ENST00000526430 THTPAQ9BU02 230 aa9.73□□□□□ -0.85
NEDD8-204ENST00000526430 BEX2Q9BXY8 128 aa9.73□□□□□ -0.85
NEDD8-204ENST00000526430 PTGES2Q9H7Z7 377 aa9.73□□□□□ -0.85
NEDD8-204ENST00000526430 ACER3Q9NUN7 267 aa9.73□□□□□ -0.85
NEDD8-204ENST00000526430 DCAF13Q9NV06 445 aaKnown RBP9.73□□□□□ -0.85
NEDD8-204ENST00000526430 A0A087WZY1 265 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 CFAP73A6NFT4 308 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 A8MXE2 369 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 H0YC42 278 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 ARPC2O15144 300 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 GYG2O15488 501 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 ME2P23368 584 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 CHMP24386 653 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 IDUAP35475 653 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 OR1E2P47887 323 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 TPD52P55327 224 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-204ENST00000526430 CLDN20P56880 219 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 FOXF1Q12946 379 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 CBFBQ13951 182 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 GANABQ14697 944 aaKnown RBP9.72□□□□□ -0.85
NEDD8-204ENST00000526430 ZSWIM7Q19AV6 140 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 EEF1A1P5Q5VTE0 462 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 ENPP6Q6UWR7 440 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 LINC00114Q6XXX2 140 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 DNM1P46Q6ZS02 220 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 BTLAQ7Z6A9 289 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 GGNQ86UU5 652 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 OR14L1PQ8NHC6 308 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 ADGRG7Q96K78 797 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 C7orf34Q96L11 122 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 WFIKKN1Q96NZ8 548 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 TRIB1Q96RU8 372 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 SPATA5L1Q9BVQ7 753 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 LRMDAQ9H2I8 198 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 KLHL28Q9NXS3 571 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 ACTR3BQ9P1U1 418 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 SLC7A8Q9UHI5 535 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 OSGIN1Q9UJX0 560 aa9.72□□□□□ -0.85
NEDD8-204ENST00000526430 A0A0G2JK05 382 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 A0A0J9YW62 118 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 EBAG9O00559 213 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 FFAR1O14842 300 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 DNAJC8O75937 253 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ATP5HO75947 161 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 PRKD3O94806 890 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 SERPINA1P01009 418 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 OPN1LWP04000 364 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 CPN1P15169 458 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF708P17019 499 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 PGCP20142 388 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ADH6P28332 368 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 EGR4Q05215 589 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 FOXF2Q12947 444 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 TOMM20Q15388 145 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 BCL2A1Q16548 175 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 LRRC23Q53EV4 343 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-204ENST00000526430 LCN8Q6JVE9 175 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 PLXDC2Q6UX71 529 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ADGRE4PQ86SQ3 457 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF440Q8IYI8 595 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF611Q8N823 705 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 BHLHE22Q8NFJ8 381 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ST8SIA1Q92185 356 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ABTB1Q969K4 478 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-204ENST00000526430 ZBTB8AQ96BR9 441 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 C3orf49Q96BT1 292 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 MRGPRX4Q96LA9 322 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 RNF145Q96MT1 663 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 PIGQQ9BRB3 760 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 MED18Q9BUE0 208 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 HHATLQ9HCP6 504 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 CTPS2Q9NRF8 586 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 DKKL1Q9UK85 242 aa9.71□□□□□ -0.86
NEDD8-204ENST00000526430 IGKV1D-42A0A075B6H8 117 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 A0A1B0GWA3 101 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 MSTNO14793 375 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 GSTA4O15217 222 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 PRSS23O95084 383 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 RCBTB2O95199 551 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 ACTL6AO96019 429 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF17P17021 662 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 CFPP27918 469 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 TACR3P29371 465 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 SLC1A3P43003 542 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 SLC6A8P48029 635 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 RAC1P63000 192 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 GABPB1Q06547 395 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-204ENST00000526430 BNIP2Q12982 314 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 OR1Q1Q15612 314 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 DNAL1Q4LDG9 190 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 PDLIM3Q53GG5 364 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-204ENST00000526430 CYP2R1Q6VVX0 501 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 WDR88Q6ZMY6 472 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF550Q7Z398 422 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 GRINAQ7Z429 371 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 ATG4DQ86TL0 474 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms