RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 NT5DC3Q86UY8 548 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 HIPK1Q86Z02 1210 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CCDC71Q8IV32 467 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 MMAAQ8IVH4 418 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 KATNAL2Q8IYT4 538 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 ATPAF2Q8N5M1 289 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 SUMF1Q8NBK3 374 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CSNK1G2-AS1Q8NCQ2 148 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 OR2AP1Q8NGE2 309 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 OR2A12Q8NGT7 310 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 OR6K2Q8NGY2 324 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 OR8D1Q8WZ84 308 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 N4BP2L2Q92802 583 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 FAM131CQ96AQ9 280 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 FAM122AQ96E09 287 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 OLFM3Q96PB7 478 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 RNF157Q96PX1 679 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CALN1Q9BXU9 219 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 TM6SF2Q9BZW4 377 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 TSGA10Q9BZW7 698 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 IL1RL2Q9HB29 575 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 RRAGDQ9NQL2 400 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 HOMER3Q9NSC5 361 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 GPR83Q9NYM4 423 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 C6orf203Q9P0P8 240 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 ZMAT5Q9UDW3 170 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 FAM153AQ9UHL3 310 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 PACSIN2Q9UNF0 486 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 STRAPQ9Y3F4 350 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 ATG2BQ96BY7 2078 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 VCANP13611 3396 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 PCDH15Q96QU1 1955 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 IGHV3-16A0A0C4DH30 117 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 TSPAN11A1L157 253 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 TRABD2BA6NFA1 517 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 C10orf142B7Z368 130 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 KPNA3O00505 521 aaPredicted RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 EI24O14681 340 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SH2D1BO14796 132 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 TSPAN2O60636 221 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 CST8O60676 142 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 RHOBTB1O94844 696 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SEMA4FO95754 770 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 NUDT14O95848 222 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 IL1BP01584 269 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 HLA-DQB2P05538 268 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 UGT2B4P06133 528 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 FCER2P06734 321 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 APRTP07741 180 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 ELK3P41970 407 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 DHPSP49366 369 aaPredicted RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 CNN1P51911 297 aaKnown RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 HNRNPFP52597 415 aaKnown RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 MAXP61244 160 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SSTP61278 116 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 RHOAP61586 193 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 DYNLT1P63172 113 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 ZNF33AQ06730 810 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 KLF5Q13887 457 aaPredicted RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 ZNF235Q14590 738 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 C15orf32Q32M92 178 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 VWA2Q5GFL6 755 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 TFDP3Q5H9I0 405 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 NHLRC3Q5JS37 347 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SLC25A30Q5SVS4 291 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 PRAMEF7Q5VXH5 474 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 LPCAT2Q7L5N7 544 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 PEX26Q7Z412 305 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 CCDC50Q8IVM0 306 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 CNTN4Q8IWV2 1026 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SYCE1Q8N0S2 351 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 BATF2Q8N1L9 274 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 ARL14Q8N4G2 192 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 HDDC3Q8N4P3 179 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 RNF10Q8N5U6 811 aaKnown RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 DEFB119Q8N690 84 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 TEX9Q8N6V9 391 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 ZNRF1Q8ND25 227 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 CCNYQ8ND76 341 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 CHDHQ8NE62 594 aaPredicted RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 AGAP11Q8TF27 550 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 TCEAL3Q969E4 200 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 ISG20Q96AZ6 181 aaKnown RBP3.04□□□□□ -1.92
CD44-219ENST00000525685 HAUS1Q96CS2 278 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 PPP1R16AQ96I34 528 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 GPR137Q96N19 417 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SPATA13Q96N96 652 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 OMDQ99983 421 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 GPR174Q9BXC1 333 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 LZTFL1Q9NQ48 299 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 FBXL12Q9NXK8 326 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 QPCTLQ9NXS2 382 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 RAB23Q9ULC3 237 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 HPCAL4Q9UM19 191 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SPATA2Q9UM82 520 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 GUCA1BQ9UMX6 200 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SCML1Q9UN30 329 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 SLC6A5Q9Y345 797 aa3.04□□□□□ -1.92
CD44-219ENST00000525685 HEY1Q9Y5J3 304 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms