RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 MAL2Q969L2 176 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 SLC35B4Q969S0 331 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 C3orf49Q96BT1 292 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 ATP6V1G3Q96LB4 118 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 NAA11Q9BSU3 229 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-204ENST00000525207 TRAF4Q9BUZ4 470 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-204ENST00000525207 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 CACYBPQ9HB71 228 aaKnown RBP8.31□□□□□ -1.08
SF3B2-204ENST00000525207 BCL2L10Q9HD36 194 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 SLC25A37Q9NYZ2 338 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 DCTN4Q9UJW0 460 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 IFT52Q9Y366 437 aa8.31□□□□□ -1.08
SF3B2-204ENST00000525207 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 TRBV5-3A0A0A0MS03 114 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 CCT8L1PA6NM43 557 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 A8MVM7 634 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 SMAD7O15105 426 aaKnown RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 FZD7O75084 574 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 NPIPB7O75200 414 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 ARAFP10398 606 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 ETS2P15036 469 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 NCF2P19878 526 aaPredicted RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 CXCR1P25024 350 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 CDKN1AP38936 164 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 IDH3AP50213 366 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 P2RY4P51582 365 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 COPZ1P61923 177 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 SLC25A3Q00325 362 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 BNIP2Q12982 314 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 CEACAM7Q14002 265 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 VEZF1Q14119 521 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 GABRA6Q16445 453 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 TSPO2Q5TGU0 170 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 OR7E24Q6IFN5 339 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 BLOC1S3Q6QNY0 202 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 TMEM108Q6UXF1 575 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 C10orf111Q8N326 155 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 TMEM99Q8N816 258 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 OR9K2Q8NGE7 335 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 GTPBP3Q969Y2 492 aaKnown RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 SPDL1Q96EA4 605 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 TRMT61AQ96FX7 289 aaKnown RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 MUS81Q96NY9 551 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 ZNF385AQ96PM9 386 aaKnown RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 CCDC28BQ9BUN5 200 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 SF3B5Q9BWJ5 86 aaKnown RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 GRIP2Q9C0E4 1043 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 SLCO5A1Q9H2Y9 848 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 ARMC7Q9H6L4 198 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 SLC7A10Q9NS82 523 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 FAIMQ9NVQ4 179 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 ADPRHL2Q9NX46 363 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 CCDC167Q9P0B6 97 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 VAPAQ9P0L0 249 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 GMEB1Q9Y692 573 aa8.3□□□□□ -1.08
SF3B2-204ENST00000525207 HEATR1Q9H583 2144 aaKnown RBP8.3□□□□□ -1.08
SF3B2-204ENST00000525207 A0A1W2PR80 420 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 FTCDNL1E5RQL4 147 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 AHSA1O95433 338 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PPIBP23284 216 aaKnown RBP8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PTAFRP25105 342 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 CD40P25942 277 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 MPGP29372 298 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PRKAR1BP31321 381 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 ATP4BP51164 291 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 ZNF83P51522 516 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 AQP5P55064 265 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 IRX1P78414 480 aaPredicted RBP8.29□□□□□ -1.08
SF3B2-204ENST00000525207 KRTAP1-1Q07627 177 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 TNK1Q13470 666 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 SQLEQ14534 574 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 ZNF311Q5JNZ3 666 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PAGE3Q5JUK9 113 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 GCNT6Q5T4J0 391 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 C9orf135Q5VTT2 229 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 C1orf140Q5VVS0 124 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 C11orf71Q6IPW1 123 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 KLHL17Q6TDP4 642 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 C6orf89Q6UWU4 347 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 B3GLCTQ6Y288 498 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 GPAT4Q86UL3 456 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 COMTD1Q86VU5 262 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 ZIC4Q8N9L1 334 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 POMGNT2Q8NAT1 580 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 NFKBIDQ8NI38 313 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 STK35Q8TDR2 534 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 STON2Q8WXE9 905 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 RADILQ96JH8 1075 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 ALKBH3Q96Q83 286 aaPredicted RBP8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PTDSS2Q9BVG9 487 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 TAPBPLQ9BX59 468 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 RSPO3Q9BXY4 272 aaPredicted RBP8.29□□□□□ -1.08
SF3B2-204ENST00000525207 ALG2Q9H553 416 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 IKZF5Q9H5V7 419 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PIF1Q9H611 641 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 SLC52A3Q9NQ40 469 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 SLC17A5Q9NRA2 495 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 TMEM45AQ9NWC5 275 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 PARPBPQ9NWS1 579 aa8.29□□□□□ -1.08
SF3B2-204ENST00000525207 CISD1Q9NZ45 108 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms