RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF670Q9BS34 389 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 BTBD10Q9BSF8 475 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TRAF4Q9BUZ4 470 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 RBM24Q9BX46 236 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 TSSK1BQ9BXA7 367 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SPATA16Q9BXB7 569 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SHCBP1LQ9BZQ2 653 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PCBD2Q9H0N5 130 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SLC25A51Q9H1U9 297 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 MUC13Q9H3R2 512 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 OSGEPL1Q9H4B0 414 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PLK3Q9H4B4 646 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 COG4Q9H9E3 785 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 FAM60AQ9NP50 221 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ADAP2Q9NPF8 381 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 IL26Q9NPH9 171 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 YAE1D1Q9NRH1 226 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PNPLA3Q9NST1 481 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.27□□□□□ -2.21
CD44-212ENST00000524922 ZNHIT6Q9NWK9 470 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 AIPL1Q9NZN9 384 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CLCF1Q9UBD9 225 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CTSFQ9UBX1 484 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ZMAT5Q9UDW3 170 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 SLC23A2Q9UGH3 650 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PRO0461Q9UI25 63 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 HOOK1Q9UJC3 728 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 CFAP45Q9UL16 551 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 EXO1Q9UQ84 846 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 TDRKHQ9Y2W6 561 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 TMEM98Q9Y2Y6 226 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CMAHPQ9Y471 501 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PCYT1BQ9Y5K3 369 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 LIPGQ9Y5X9 500 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 FKBP7Q9Y680 259 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ZNF407Q9C0G0 2248 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SPTBP11277 2137 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 GLYATL1P3A0A0U1RQE8 302 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 A0A1W2PNV4 684 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 LRRD1A4D1F6 860 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 URADA6NGE7 173 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ACOD1A6NK06 481 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ARHGEF33A8MVX0 844 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 B4DSR2 109 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 EEF2KO00418 725 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 NDC80O14777 642 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 HS6ST1O60243 411 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TRIM3O75382 744 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 GPC4O75487 556 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CLPXO76031 633 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 SMC2O95347 1197 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GOT2P00505 430 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 FTH1P02794 183 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PRB2P02812 416 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 ABCB1P08183 1280 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 IFI6P09912 130 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CCDC172P0C7W6 258 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 MYBL1P10243 752 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 KRT3P12035 628 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GZMAP12544 262 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ATP1B2P14415 290 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 ERCC2P18074 760 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 MAGP20916 626 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CD9P21926 228 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CMA1P23946 247 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PON1P27169 355 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PPARGP37231 505 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 NSFP46459 744 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 RPL21P46778 160 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 NPY2RP49146 381 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PPM1FP49593 454 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 CAMPP49913 170 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CDK9P50750 372 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 ARF3P61204 181 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 RPS15AP62244 130 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 ACTG1P63261 375 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CYCSP99999 105 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 OC90Q02509 493 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 SLC10A7Q0GE19 358 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ILF2Q12905 390 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 PLA2G7Q13093 441 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 MSLNQ13421 630 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 CUL4AQ13619 759 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 SERTAD2Q14140 314 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 NFE2L1Q14494 772 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 MESDQ14696 234 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PDK2Q15119 407 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 RPS6KA1Q15418 735 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TSTQ16762 297 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 PHKG1Q16816 387 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 C15orf32Q32M92 178 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TMEM95Q3KNT9 176 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 KBTBD12Q3ZCT8 623 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GLYR1Q49A26 553 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 PHLDA2Q53GA4 152 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TFDP3Q5H9I0 405 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 NCMAPQ5T1S8 102 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ERMARDQ5T6L9 678 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms