RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ADH5P11766 374 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 PTH2RP49190 550 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 P2RX1P51575 399 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ZNF234Q14588 700 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ZIC1Q15915 447 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 RD3Q7Z3Z2 195 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ZNF511Q8NB15 262 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 OR4N2Q8NGD1 307 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 OR8D1Q8WZ84 308 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 RASD2Q96D21 266 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 SMIM19Q96E16 107 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 SGTBQ96EQ0 304 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 MICU1Q9BPX6 476 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 AIFM2Q9BRQ8 373 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 SHARPINQ9H0F6 387 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 TAS2R10Q9NYW0 307 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 FLRT3Q9NZU0 649 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 RABL2AQ9UBK7 228 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 CA5BQ9Y2D0 317 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 MRPS2Q9Y399 296 aaKnown RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 NPFFR2Q9Y5X5 522 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 KCNAB3O43448 404 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 KRT33AO76009 404 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 LYPD3O95274 346 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 RLN2P04090 185 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ACHEP22303 614 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 AK4P27144 223 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 AKR1C2P52895 323 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 DEFA5Q01523 94 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 AKR1C1Q04828 323 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 STK11Q15831 433 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 FAM74A3Q4VXF1 159 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 UBE2NLQ5JXB2 153 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 SEZ6L2Q6UXD5 910 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 GLDNQ6ZMI3 551 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ERN2Q76MJ5 926 aaKnown RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 THEM6Q8WUY1 208 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 SLC25A28Q96A46 364 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 FOXN4Q96NZ1 517 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ANKRD19PQ9H560 264 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 CACYBPQ9HB71 228 aaKnown RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 TMEM138Q9NPI0 162 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 MYEF2Q9P2K5 600 aaKnown RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 OR5V1Q9UGF6 321 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ING1Q9UK53 422 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-202ENST00000524773 MED31Q9Y3C7 131 aa12.1□□□□□ -0.47
CAPN1-202ENST00000524773 GMFGO60234 142 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ZFPL1O95159 310 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 GPANK1O95872 356 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 GALP22466 123 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 EMDP50402 254 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 STX4Q12846 297 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 DCST2Q5T1A1 773 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 GJD3Q8N144 294 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 LRRC25Q8N386 305 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 OR10AC1Q8NH08 325 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 FCAMRQ8WWV6 532 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 COX14Q96I36 57 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ZBP1Q9H171 429 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 NRIP3Q9NQ35 241 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 IFITM5A6NNB3 132 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 P2RX6O15547 441 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 RCBTB2O95199 551 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 EPCAMP16422 314 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 LAG3P18627 525 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 GABRA3P34903 492 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 RPL4P36578 427 aaKnown RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 CBFBQ13951 182 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ARHGAP19Q14CB8 494 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 LRRC37A5PQ49AS3 106 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 METTL11BQ5VVY1 283 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 CDK20Q8IZL9 346 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 COX18Q8N8Q8 333 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 NARS2Q96I59 477 aaKnown RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 C10orf90Q96M02 699 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 Q96M85 177 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 HSPA12BQ96MM6 686 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 JAM3Q9BX67 310 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 STARD5Q9NSY2 213 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 ABRACLQ9P1F3 81 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 KLHL9Q9P2J3 617 aa12.09□□□□□ -0.47
CAPN1-202ENST00000524773 FBXO9Q9UK97 447 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-202ENST00000524773 BAIAP2Q9UQB8 552 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms