RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.31□□□□□ -1.56
FAM49B-228ENST00000523993 BTNL2Q9UIR0 455 aa5.31□□□□□ -1.56
FAM49B-228ENST00000523993 SLC35A3Q9Y2D2 325 aa5.31□□□□□ -1.56
FAM49B-228ENST00000523993 ATRQ13535 2644 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 DNHD1Q96M86 4753 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 NPIPA5A0A0B4J1W7 369 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CENPVL1A0A0U1RR11 272 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 RNF103-CHMP3A0A140T963 221 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 NPIPA7E9PJI5 369 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 GTPBP1O00178 669 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SMAD9O15198 467 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CFLARO15519 480 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 GMFGO60234 142 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 H6PDO95479 791 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 PMS2P2O95744 297 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 DANCRP0C864 163 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 NPIPA8P0DM63 369 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 FUT4P22083 530 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 RPS4Y1P22090 263 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SFTPDP35247 375 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 APOBEC1P41238 236 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SLC1A6P48664 564 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 PTH2RP49190 550 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CLNS1AP54105 237 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 LTBQ06643 244 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 FUT5Q11128 374 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CAPRIN1Q14444 709 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 QPRTQ15274 297 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CHI3L2Q15782 390 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 ETFDHQ16134 617 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 MAPK14Q16539 360 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 EXOC3L2Q2M3D2 409 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SPDYE7PQ495Y7 208 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 TIGD2Q4W5G0 525 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SYT14P1Q58G82 188 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 NCMAPQ5T1S8 102 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 PDZK1Q5T2W1 519 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CD276Q5ZPR3 534 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 ABLIM2Q6H8Q1 611 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 OR4F3Q6IEY1 312 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 FRRS1Q6ZNA5 592 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 DNM1P46Q6ZS02 220 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 TMPPEQ6ZT21 453 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 EIF3MQ7L2H7 374 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 NUFIP2Q7Z417 695 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 YTHDF3Q7Z739 585 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 P2RY8Q86VZ1 359 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 P3H2Q8IVL5 708 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CLECL1Q8IZS7 167 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 OR10H5Q8NGA6 315 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 OR5AK3PQ8NH89 298 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 S100PBPQ96BU1 408 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 ZC3HAV1LQ96H79 300 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 BOD1Q96IK1 185 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 HRASLS5Q96KN8 279 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SLC35G5Q96KT7 338 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CCDC115Q96NT0 180 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 THUMPD3Q9BV44 507 aaKnown RBP5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CCDC106Q9BWC9 280 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 POTEKPQ9BYX7 375 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 DPY30Q9C005 99 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CXorf56Q9H5V9 222 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 UBTD1Q9HAC8 227 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 NGBQ9NPG2 151 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 SLAMF8Q9P0V8 285 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 CLEC4AQ9UMR7 237 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 LIPT1Q9Y234 373 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 TRAPPC4Q9Y296 219 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 HDGFL3Q9Y3E1 203 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 COL6A5A8TX70 2615 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
FAM49B-228ENST00000523993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.29□□□□□ -1.564e-6■■■□□ 17.5
FAM49B-228ENST00000523993 ZNF716A6NP11 495 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 E9PBE3 544 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 PDLIM1O00151 329 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 HMGN4O00479 90 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 RGS16O15492 202 aaPredicted RBP5.29□□□□□ -1.56
FAM49B-228ENST00000523993 ZNF208O43345 1280 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 SNNO75324 88 aaPredicted RBP5.29□□□□□ -1.56
FAM49B-228ENST00000523993 NUDT14O95848 222 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 PLAUP00749 431 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 CSTAP01040 98 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 OPN1LWP04000 364 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 ALDOCP09972 364 aaKnown RBP5.29□□□□□ -1.56
FAM49B-228ENST00000523993 LBPP18428 481 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 PGCP20142 388 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 ADSLP30566 484 aaPredicted RBP5.29□□□□□ -1.56
FAM49B-228ENST00000523993 DIO1P49895 249 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 CSNK2A1P68400 391 aaPredicted RBP5.29□□□□□ -1.56
FAM49B-228ENST00000523993 KCNJ10P78508 379 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 RASGEF1BQ0VAM2 473 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 IKZF1Q13422 519 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 GPR68Q15743 365 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 TAB1Q15750 504 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 NDUFAF6Q330K2 333 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 KRT71Q3SY84 523 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 SPANXN4Q5MJ08 99 aa5.29□□□□□ -1.56
FAM49B-228ENST00000523993 TIMM23BQ5SRD1 257 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms