RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 FOXL1Q12952 345 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF141Q15928 474 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 PDCD2Q16342 344 aaPredicted RBP10.02□□□□□ -0.81
SDCBP-211ENST00000523441 PGS1Q32NB8 556 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 TMEM225Q6GV28 225 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 C8orf74Q6P047 294 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 USP43Q70EL4 1123 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 ARFGAP2Q8N6H7 521 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 KRTCAP2Q8N6L1 136 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 ZIC4Q8N9L1 334 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 POMGNT2Q8NAT1 580 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 NUP37Q8NFH4 326 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 AGR3Q8TD06 166 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 OR5P2Q8WZ92 322 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 RAB8BQ92930 207 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 YIPF5Q969M3 257 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 SLC35G5Q96KT7 338 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 MRPL37Q9BZE1 423 aaKnown RBP10.02□□□□□ -0.81
SDCBP-211ENST00000523441 NMUR2Q9GZQ4 415 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 TBK1Q9UHD2 729 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF180Q9UJW8 692 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 FBXO9Q9UK97 447 aaPredicted RBP10.02□□□□□ -0.81
SDCBP-211ENST00000523441 CMAHPQ9Y471 501 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 A0A087WUV0 522 aaPredicted RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 TRAV20A0A0B4J274 112 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 TMEM233B4DJY2 109 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 G3V2L1 256 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 M0R233 179 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 PIP5K1BO14986 540 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 DNPH1O43598 174 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 TFP02787 698 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 NUDT17P0C025 328 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 OR12D1P0DN82 309 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 NAT2P11245 290 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 ARF1P84077 181 aaKnown RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 ROR2Q01974 943 aaKnown RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 BNIP2Q12982 314 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 PTGR1Q14914 329 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 MSMPQ1L6U9 139 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 LSM12Q3MHD2 195 aaKnown RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 FAM153CQ494X1 144 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 GPAT3Q53EU6 434 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 HIST2H2BDQ6DRA6 164 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 EMBQ6PCB8 327 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 C6orf120Q7Z4R8 191 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 MDP1Q86V88 176 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 LRP11Q86VZ4 500 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 SIGLECL1Q8N7X8 197 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 XAGE5Q8WWM1 108 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 MTERF3Q96E29 417 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF764Q96H86 408 aaPredicted RBP10.01□□□□□ -0.81
SDCBP-211ENST00000523441 OR51I1Q9H343 314 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 TUBB1Q9H4B7 451 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF442Q9H7R0 627 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 NOX3Q9HBY0 568 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 OBP2BQ9NPH6 170 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 ATP6V1HQ9UI12 483 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 EMCNQ9ULC0 261 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 TRAPPC4Q9Y296 219 aa10.01□□□□□ -0.81
SDCBP-211ENST00000523441 CMYA5Q8N3K9 4069 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 RNF103-CHMP3A0A140T963 221 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF503-AS2A6NEH8 195 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 AZIN1O14977 448 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 LSM1O15116 133 aaKnown RBP10□□□□□ -0.81
SDCBP-211ENST00000523441 PLPP2O43688 288 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 PEX11AO75192 247 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 NCR1O76036 304 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 PRSS23O95084 383 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 HKR1P10072 659 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 PRPH2P23942 346 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 POLR2HP52434 150 aaKnown RBP10□□□□□ -0.81
SDCBP-211ENST00000523441 LMO4P61968 165 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 HBA1P69905 142 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 PIGFQ07326 219 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 ZP4Q12836 540 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 ARHGAP11BQ3KRB8 267 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 DCAF12L2Q5VW00 463 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 TNFAIP8L2Q6P589 184 aaPredicted RBP10□□□□□ -0.81
SDCBP-211ENST00000523441 PAQR6Q6TCH4 344 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 C1QL2Q7Z5L3 287 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 CLECL1Q8IZS7 167 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 KDM8Q8N371 416 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 RNF217Q8TC41 542 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 SFXN5Q8TD22 340 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 RDH5Q92781 318 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 TMEM45BQ96B21 275 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 ZG16BQ96DA0 208 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 FCRL1Q96LA6 429 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 TMPRSS13Q9BYE2 586 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 NELFAQ9H3P2 528 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF665Q9H7R5 613 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 OXSMQ9NWU1 459 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 MYEF2Q9P2K5 600 aaKnown RBP10□□□□□ -0.81
SDCBP-211ENST00000523441 DUSP13Q9UII6 198 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 OSGIN1Q9UJX0 560 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms