RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	TSPO2	Q5TGU0	170 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	CASP12	Q6UXS9	341 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	DLEU7	Q6UYE1	221 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	SSX8	Q7RTT4	187 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	HDX	Q7Z353	690 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	WDR31	Q8NA23	367 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	OR9K2	Q8NGE7	335 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	OR52N5	Q8NH56	324 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	NFKBID	Q8NI38	313 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	BBS10	Q8TAM1	723 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	SMAP2	Q8WU79	429 aa	Predicted RBP	10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	DYDC1	Q8WWB3	177 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	CKAP2	Q8WWK9	683 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	SLC35B4	Q969S0	331 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	TMEM45B	Q96B21	275 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	ZNF385A	Q96PM9	386 aa	Known RBP	10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	BDH2	Q9BUT1	245 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	SF3B5	Q9BWJ5	86 aa	Known RBP	10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	AMBRA1	Q9C0C7	1298 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	CXorf56	Q9H5V9	222 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	INTS9	Q9NV88	658 aa	Known RBP	10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	PARPBP	Q9NWS1	579 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	TAS2R16	Q9NYV7	291 aa		10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	YLPM1	P49750	1951 aa	Known RBP	10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125	FN1	P02751	2386 aa	Known RBP	10.88	□□□□□ -0.67
VEGFA-223	ENST00000523125		A0A1W2PP18	115 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125		A0A1W2PR80	420 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	CIB4	A0PJX0	185 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	CCT8L1P	A6NM43	557 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	FTCDNL1	E5RQL4	147 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ABCD4	O14678	606 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	TPST1	O60507	370 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	CD8A	P01732	235 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	NCF2	P19878	526 aa	Predicted RBP	10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ATP5J2	P56134	94 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	RPS4X	P62701	263 aa	Known RBP	10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	IRX1	P78414	480 aa	Predicted RBP	10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	LTB	Q06643	244 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ADRM1	Q16186	407 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	C1orf140	Q5VVS0	124 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	OR7E24	Q6IFN5	339 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	CLEC9A	Q6UXN8	241 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	STON2	Q8WXE9	905 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	THOC1	Q96FV9	657 aa	Known RBP	10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	MAGEB18	Q96M61	343 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	PTDSS2	Q9BVG9	487 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ZNF385D	Q9H6B1	395 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ARMC7	Q9H6L4	198 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	VIPAS39	Q9H9C1	493 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ADPRHL2	Q9NX46	363 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	DCTN4	Q9UJW0	460 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	ALPK2	Q86TB3	2170 aa		10.87	□□□□□ -0.67
VEGFA-223	ENST00000523125	C5orf58	C9J3I9	102 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	SMAD7	O15105	426 aa	Known RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	FZD7	O75084	574 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	HEXA	P06865	529 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	PPIB	P23284	216 aa	Known RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	HTR2A	P28223	471 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	PRKAR1B	P31321	381 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	ZNF83	P51522	516 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	SLC25A3	Q00325	362 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	CDK6	Q00534	326 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	SPOCK1	Q08629	439 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	SQLE	Q14534	574 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	GLIPR1L2	Q4G1C9	344 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	GCNT6	Q5T4J0	391 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	C9orf135	Q5VTT2	229 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	TMEM225	Q6GV28	225 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	REEP3	Q6NUK4	255 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	C6orf89	Q6UWU4	347 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	CREB3L2	Q70SY1	520 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	AAED1	Q7RTV5	226 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	LSMEM1	Q8N8F7	131 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	MFSD8	Q8NHS3	518 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	STK35	Q8TDR2	534 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	WFDC6	Q9BQY6	131 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	PRR14	Q9BWN1	585 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	GRIP2	Q9C0E4	1043 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	PIF1	Q9H611	641 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	TMEM38A	Q9H6F2	299 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	CACYBP	Q9HB71	228 aa	Known RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	CISD1	Q9NZ45	108 aa	Known RBP	10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	UPB1	Q9UBR1	384 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	CSPG4	Q6UVK1	2322 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125	ARFGEF3	Q5TH69	2177 aa		10.86	□□□□□ -0.67
VEGFA-223	ENST00000523125		E7EQL1	145 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	SASH3	O75995	380 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	CD40	P25942	277 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	MPG	P29372	298 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	CDKN1A	P38936	164 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	RPS5	P46782	204 aa	Known RBP	10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	CDH11	P55287	796 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	LGALS3BP	Q08380	585 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	RUNDC3A	Q59EK9	446 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	DHRS4L2	Q6PKH6	230 aa		10.85	□□□□□ -0.67
VEGFA-223	ENST00000523125	TMEM108	Q6UXF1	575 aa		10.85	□□□□□ -0.67

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