RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MPGP29372 298 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 APOBEC3AP31941 199 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-209ENST00000522987 SELENOPP49908 381 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 EFNA4P52798 201 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 DSCR9P59020 149 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 PRPS1P60891 318 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 CHRNB3Q05901 458 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 BST1Q10588 318 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 MAPK11Q15759 364 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 GTDC1Q4AE62 458 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 CYB5R2Q6BCY4 276 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 ZNF544Q6NX49 715 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 PAQR6Q6TCH4 344 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 LRRC74BQ6ZQY2 392 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 SPATA19Q7Z5L4 167 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 PMM1Q92871 262 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 SEC61A2Q9H9S3 476 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 MEAF6Q9HAF1 191 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 AIG1Q9NVV5 245 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 PMF1-BGLAPU3KQ54 211 aa13.47□□□□□ -0.25
MRPS28-209ENST00000522987 A0A096LPE4 126 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 IGHV1-18A0A0C4DH31 117 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 A0A1W2PPZ6 126 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 SLC35F4A4IF30 521 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 BIRC5O15392 142 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 BCHEP06276 602 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 PGRP06401 933 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 GPIP06744 558 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 DBIP07108 87 aaKnown RBP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 RPS4Y1P22090 263 aaKnown RBP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 USF1P22415 310 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 DPY19L1Q2PZI1 675 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 MST1LQ2TV78 715 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 ATG16L1Q676U5 607 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 NXNQ6DKJ4 435 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 TMEM225Q6GV28 225 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 NIPAL3Q6P499 406 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 LINGO2Q7L985 606 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 CMIPQ8IY22 773 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 KDM8Q8N371 416 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 TRIML2Q8N7C3 387 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 C1orf162Q8NEQ5 155 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 OR52P1PQ8NH57 321 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 SHARPINQ9H0F6 387 aa13.46□□□□□ -0.25
MRPS28-209ENST00000522987 MTHFD2LQ9H903 347 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-209ENST00000522987 AQP7P3A6NL99 342 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 FRS3O43559 492 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 LMX1BO60663 402 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 WNT11O96014 354 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 UQCRBP14927 111 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 NCF2P19878 526 aaPredicted RBP13.45□□□□□ -0.26
MRPS28-209ENST00000522987 IGFBP5P24593 272 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 FKBP2P26885 142 aaKnown RBP13.45□□□□□ -0.26
MRPS28-209ENST00000522987 ACAA2P42765 397 aaKnown RBP13.45□□□□□ -0.26
MRPS28-209ENST00000522987 CRATP43155 626 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 HOXC5Q00444 222 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 GNA13Q14344 377 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 KRTAP24-1Q3LI83 254 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 TBRG1Q3YBR2 411 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 AP1ARQ63HQ0 302 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 SLC46A3Q7Z3Q1 461 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 PEX5LQ8IYB4 626 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 C17orf78Q8N4C9 275 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 OIT3Q8WWZ8 545 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 SLC25A36Q96CQ1 311 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 FOXN4Q96NZ1 517 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 ZBTB18Q99592 522 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 KCNS3Q9BQ31 491 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 TMEM109Q9BVC6 243 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 TAPBPLQ9BX59 468 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 ADAM19Q9H013 955 aa13.45□□□□□ -0.26
MRPS28-209ENST00000522987 ZNF443Q9Y2A4 671 aaPredicted RBP13.45□□□□□ -0.26
MRPS28-209ENST00000522987 CDHR4A6H8M9 788 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 RFXANKO14593 260 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 UPK3AO75631 287 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 F12P00748 615 aaPredicted RBP13.44□□□□□ -0.26
MRPS28-209ENST00000522987 CELA3BP08861 270 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 BMP4P12644 408 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 PDLIM4P50479 330 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 ANXA11P50995 505 aaKnown RBP13.44□□□□□ -0.26
MRPS28-209ENST00000522987 SWI5Q1ZZU3 235 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 CEP85LQ5SZL2 805 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 PRAMEF8Q5VWM4 474 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 PRAMEF7Q5VXH5 474 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 OGFOD2Q6N063 350 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 SERPINA11Q86U17 422 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 OR1K1Q8NGR3 316 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 SLC38A2Q96QD8 506 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 PRR14Q9BWN1 585 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 TMEM45AQ9NWC5 275 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 P2RX2Q9UBL9 471 aa13.44□□□□□ -0.26
MRPS28-209ENST00000522987 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms